Variant report

Variant rs3809470
Chromosome Location chr14:105531945-105531946
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105525600-105534200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
2 chr14:105525800-105533400 Weak transcription Osteobl bone
3 chr14:105526400-105532800 Flanking Active TSS Primary T cells fromperipheralblood blood
4 chr14:105528800-105532000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr14:105528800-105532000 Weak transcription Right Ventricle heart
6 chr14:105528800-105542000 Weak transcription Right Atrium heart
7 chr14:105529600-105532800 Flanking Active TSS Primary B cells from cord blood blood
8 chr14:105530400-105532000 Active TSS Rectal Mucosa Donor 29 rectum
9 chr14:105530400-105532200 Active TSS Brain Hippocampus Middle brain
10 chr14:105530400-105532400 Active TSS Rectal Smooth Muscle rectum
11 chr14:105530400-105532600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
12 chr14:105530600-105532000 Active TSS Brain Cingulate Gyrus brain
13 chr14:105530600-105532600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr14:105530800-105532000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
15 chr14:105530800-105532000 Active TSS Primary T killer memory cells from peripheral blood blood
16 chr14:105530800-105532000 Active TSS Colonic Mucosa Colon
17 chr14:105530800-105532000 Active TSS Monocytes-CD14+_RO01746 blood
18 chr14:105530800-105532400 Active TSS Esophagus oesophagus
19 chr14:105531000-105532000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr14:105531000-105532000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr14:105531000-105532000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr14:105531000-105532000 Active TSS Stomach Smooth Muscle stomach
23 chr14:105531000-105532200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr14:105531000-105532200 Flanking Active TSS Fetal Thymus thymus
25 chr14:105531000-105532200 Active TSS Sigmoid Colon Sigmoid Colon
26 chr14:105531000-105532200 Enhancers Stomach Mucosa stomach
27 chr14:105531000-105532400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr14:105531000-105532400 Active TSS Rectal Mucosa Donor 31 rectum
29 chr14:105531000-105532600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr14:105531000-105532600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
31 chr14:105531000-105532600 Enhancers NH-A brain
32 chr14:105531000-105532800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr14:105531000-105534400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr14:105531000-105534600 Enhancers Spleen Spleen
35 chr14:105531200-105532400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr14:105531200-105533000 Enhancers Lung lung
37 chr14:105531400-105532000 Active TSS Primary monocytes fromperipheralblood blood
38 chr14:105531400-105532000 Active TSS Primary T helper naive cells from peripheral blood blood
39 chr14:105531400-105532000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
40 chr14:105531400-105532000 Active TSS Primary T killer naive cells fromperipheralblood blood
41 chr14:105531400-105532000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr14:105531400-105532000 Enhancers HSMMtube muscle
43 chr14:105531400-105532600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr14:105531400-105542800 Weak transcription Gastric stomach
45 chr14:105531600-105532000 Active TSS Primary neutrophils fromperipheralblood blood
46 chr14:105531600-105532000 Active TSS Primary B cells from peripheral blood blood
47 chr14:105531600-105532000 Active TSS Primary T cells from cord blood blood
48 chr14:105531600-105532000 Enhancers Primary hematopoietic stem cells blood
49 chr14:105531600-105532000 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr14:105531600-105532000 Active TSS Primary T helper naive cells fromperipheralblood blood

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