Variant report

Variant rs3821857
Chromosome Location chr3:53738460-53738461
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53683200-53744200 Weak transcription Brain Inferior Temporal Lobe brain
2 chr3:53715600-53739600 Weak transcription Brain Anterior Caudate brain
3 chr3:53721000-53739800 Weak transcription Brain Cingulate Gyrus brain
4 chr3:53723200-53743400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr3:53724800-53739400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:53726600-53744000 Weak transcription Duodenum Mucosa Duodenum
7 chr3:53726800-53743400 Weak transcription Spleen Spleen
8 chr3:53734600-53738600 Weak transcription Fetal Muscle Leg muscle
9 chr3:53734600-53739000 Strong transcription Fetal Intestine Small intestine
10 chr3:53735600-53740600 Strong transcription Fetal Intestine Large intestine
11 chr3:53736200-53738600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:53736200-53738800 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr3:53736200-53740600 Enhancers Fetal Thymus thymus
14 chr3:53736600-53739200 Weak transcription Pancreas Pancrea
15 chr3:53736800-53738800 Enhancers Skeletal Muscle Male skeletal muscle
16 chr3:53736800-53744000 Weak transcription Stomach Smooth Muscle stomach
17 chr3:53737400-53739800 Enhancers Primary neutrophils fromperipheralblood blood
18 chr3:53737400-53747800 Weak transcription Fetal Brain Male brain
19 chr3:53737800-53739400 Enhancers Right Ventricle heart
20 chr3:53737800-53740000 Enhancers Left Ventricle heart
21 chr3:53737800-53740400 Enhancers Right Atrium heart
22 chr3:53738000-53739000 Enhancers Fetal Heart heart
23 chr3:53738000-53739200 Enhancers Skeletal Muscle Female skeletal muscle
24 chr3:53738000-53739400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr3:53738400-53739000 Weak transcription Fetal Lung lung
26 chr3:53738400-53739200 Enhancers Adipose Nuclei Adipose
27 chr3:53738400-53741400 Enhancers Primary hematopoietic stem cells short term culture blood

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