Variant report
Variant | rs3822679 |
---|---|
Chromosome Location | chr5:96351473-96351474 |
allele | C/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:96304800-96359600 | Weak transcription | Hela-S3 | cervix |
2 | chr5:96314000-96360200 | Weak transcription | Fetal Brain Male | brain |
3 | chr5:96315400-96374800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
4 | chr5:96315600-96353400 | Weak transcription | Pancreas | Pancrea |
5 | chr5:96315600-96358600 | Weak transcription | Brain Substantia Nigra | brain |
6 | chr5:96316000-96360000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
7 | chr5:96320000-96357600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
8 | chr5:96322400-96353600 | Weak transcription | Right Ventricle | heart |
9 | chr5:96322400-96358600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
10 | chr5:96322400-96359600 | Weak transcription | Gastric | stomach |
11 | chr5:96329800-96358800 | Weak transcription | Brain Germinal Matrix | brain |
12 | chr5:96330000-96359800 | Weak transcription | Aorta | Aorta |
13 | chr5:96330400-96359400 | Weak transcription | Fetal Brain Female | brain |
14 | chr5:96330600-96353600 | Weak transcription | Esophagus | oesophagus |
15 | chr5:96331600-96356200 | Weak transcription | Fetal Stomach | stomach |
16 | chr5:96331600-96357800 | Weak transcription | Spleen | Spleen |
17 | chr5:96333600-96374000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
18 | chr5:96333800-96372800 | Strong transcription | Placenta | Placenta |
19 | chr5:96334800-96351800 | Weak transcription | A549 | lung |
20 | chr5:96335800-96359600 | Weak transcription | Stomach Mucosa | stomach |
21 | chr5:96336000-96352400 | Weak transcription | NHEK | skin |
22 | chr5:96336200-96357800 | Weak transcription | Fetal Intestine Small | intestine |
23 | chr5:96336600-96355400 | Weak transcription | Stomach Smooth Muscle | stomach |
24 | chr5:96336600-96359400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
25 | chr5:96336600-96359400 | Weak transcription | Colonic Mucosa | Colon |
26 | chr5:96336800-96355200 | Weak transcription | Colon Smooth Muscle | Colon |
27 | chr5:96337600-96355200 | Weak transcription | Rectal Smooth Muscle | rectum |
28 | chr5:96340000-96351600 | Weak transcription | Ovary | ovary |
29 | chr5:96340600-96359800 | Weak transcription | NHDF-Ad | bronchial |
30 | chr5:96340800-96359800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
31 | chr5:96341000-96358800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
32 | chr5:96342600-96374400 | Weak transcription | HepG2 | liver |
33 | chr5:96342800-96358600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
34 | chr5:96343000-96354400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
35 | chr5:96343000-96355400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
36 | chr5:96343000-96359000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
37 | chr5:96343200-96355800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
38 | chr5:96343200-96360000 | Weak transcription | Brain Angular Gyrus | brain |
39 | chr5:96344800-96356000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
40 | chr5:96344800-96356200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
41 | chr5:96345400-96353600 | Weak transcription | Brain Hippocampus Middle | brain |
42 | chr5:96345400-96355200 | Weak transcription | Fetal Heart | heart |
43 | chr5:96345400-96357800 | Strong transcription | Dnd41 | blood |
44 | chr5:96345600-96358800 | Weak transcription | Small Intestine | intestine |
45 | chr5:96345800-96357600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
46 | chr5:96345800-96359600 | Weak transcription | K562 | blood |
47 | chr5:96346000-96357600 | Strong transcription | Primary T cells fromperipheralblood | blood |
48 | chr5:96346400-96356800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
49 | chr5:96346400-96357400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
50 | chr5:96346600-96356200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |