Variant report

Variant	rs3827554
Chromosome Location	chr3:195809116-195809117
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SMARCB1	chr3:195807938-195809369	Hela-S3	cervix:	n/a	n/a
2	MAZ	chr3:195807823-195809960	IMR90	lung:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429
3	RCOR1	chr3:195808718-195809344	K562	blood:	n/a	n/a
4	SIN3AK20	chr3:195808749-195809189	HepG2	liver:	n/a	n/a
5	PBX3	chr3:195808658-195809351	SK-N-SH	brain:	n/a	n/a
6	BCLAF1	chr3:195808620-195809623	GM12878	blood:	n/a	chr3:195809098-195809111 chr3:195808762-195808775 chr3:195809001-195809014
7	GABPA	chr3:195808801-195809258	H1-hESC	embryonic stem cell:	n/a	chr3:195809102-195809111 chr3:195809081-195809090 chr3:195809001-195809010
8	TAF1	chr3:195808832-195809214	SK-N-SH	brain:	n/a	n/a
9	EGR1	chr3:195808813-195809190	GM12878	blood:	n/a	chr3:195809002-195809015 chr3:195809080-195809090 chr3:195809000-195809010 chr3:195809033-195809042 chr3:195808999-195809013 chr3:195809007-195809017
10	IRF1	chr3:195807406-195809731	K562	blood:	n/a	chr3:195809586-195809600 chr3:195807710-195807724 chr3:195809425-195809445 chr3:195808997-195809011 chr3:195809588-195809602 chr3:195809583-195809600 chr3:195809587-195809607 chr3:195809588-195809599 chr3:195807800-195807817 chr3:195809588-195809601 chr3:195809588-195809601 chr3:195807600-195807617 chr3:195809080-195809094 chr3:195809589-195809603 chr3:195809585-195809599 chr3:195809588-195809601 chr3:195809536-195809550
11	POLR2A	chr3:195805531-195809302	K562	blood:	n/a	n/a
12	CREB1	chr3:195808407-195809421	K562	blood:	n/a	n/a
13	ARID3A	chr3:195808564-195809464	K562	blood:	n/a	n/a
14	EP300	chr3:195808785-195809227	SK-N-SH_RA	brain:	n/a	n/a
15	MXI1	chr3:195807879-195809274	H1-hESC	embryonic stem cell:	n/a	chr3:195808418-195808427
16	E2F1	chr3:195808004-195809453	Hela-S3	cervix:	n/a	chr3:195808431-195808441 chr3:195808996-195809006 chr3:195808792-195808799 chr3:195808792-195808799 chr3:195809154-195809165 chr3:195809081-195809090 chr3:195809154-195809161 chr3:195809001-195809010 chr3:195809154-195809165 chr3:195808792-195808799 chr3:195809102-195809111 chr3:195808791-195808803 chr3:195808005-195808020 chr3:195809154-195809165
17	YY1	chr3:195808673-195809314	H1-hESC	embryonic stem cell:	n/a	chr3:195809001-195809010 chr3:195809099-195809113 chr3:195809118-195809132 chr3:195809081-195809090 chr3:195808765-195808779 chr3:195808999-195809013 chr3:195808710-195808724
18	YY1	chr3:195808648-195809193	H1-hESC	embryonic stem cell:	n/a	chr3:195809001-195809010 chr3:195809099-195809113 chr3:195809118-195809132 chr3:195809081-195809090 chr3:195808765-195808779 chr3:195808999-195809013 chr3:195808710-195808724
19	PML	chr3:195808523-195809413	MCF-7	breast:	n/a	n/a
20	CTCF	chr3:195808980-195809130	GM06990	blood:	n/a	chr3:195809010-195809023 chr3:195809013-195809022
21	RELA	chr3:195808793-195809243	GM18526	blood:	n/a	n/a
22	POLR2A	chr3:195807401-195809348	GM12878	blood:	n/a	n/a
23	MYC	chr3:195808149-195809324	MCF-7	breast:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
24	CBX3	chr3:195808367-195809805	K562	blood:	n/a	n/a
25	REST	chr3:195807744-195809343	MCF-7	breast:	n/a	chr3:195808437-195808457 chr3:195808826-195808835 chr3:195809118-195809131
26	POLR2A	chr3:195807342-195809437	Hela-S3	cervix:	n/a	n/a
27	EP300	chr3:195808755-195809437	GM12878	blood:	n/a	n/a
28	ZNF143	chr3:195808741-195809258	H1-hESC	embryonic stem cell:	n/a	n/a
29	ZBTB33	chr3:195808785-195809282	K562	blood:	n/a	chr3:195809047-195809062 chr3:195809103-195809113
30	MAX	chr3:195807825-195809782	Hela-S3	cervix:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
31	POLR2A	chr3:195808727-195809127	HUVEC	blood vessel:	n/a	n/a
32	ELF1	chr3:195808185-195809255	K562	blood:	n/a	chr3:195808429-195808441 chr3:195808337-195808349
33	IRF1	chr3:195807481-195809670	K562	blood:	n/a	chr3:195809586-195809600 chr3:195807710-195807724 chr3:195809425-195809445 chr3:195808997-195809011 chr3:195809588-195809602 chr3:195809583-195809600 chr3:195809587-195809607 chr3:195809588-195809599 chr3:195807800-195807817 chr3:195809588-195809601 chr3:195809588-195809601 chr3:195807600-195807617 chr3:195809080-195809094 chr3:195809589-195809603 chr3:195809585-195809599 chr3:195809588-195809601 chr3:195809536-195809550
34	TAF1	chr3:195808236-195809356	HepG2	liver:	n/a	n/a
35	JUND	chr3:195808819-195809118	H1-hESC	embryonic stem cell:	n/a	chr3:195809080-195809089
36	POLR2A	chr3:195808174-195809339	H1-hESC	embryonic stem cell:	n/a	n/a
37	BCL3	chr3:195808745-195809294	GM12878	blood:	n/a	chr3:195809098-195809111 chr3:195808762-195808775 chr3:195809001-195809014
38	SIN3AK20	chr3:195808680-195809348	PANC-1	pancreas:	n/a	n/a
39	CEBPD	chr3:195808777-195809272	HepG2	liver:	n/a	n/a
40	POLR2A	chr3:195808020-195809460	HepG2	liver:	n/a	n/a
41	POLR2A	chr3:195807009-195809500	HepG2	liver:	n/a	n/a
42	FOXM1	chr3:195808721-195809483	GM12878	blood:	n/a	n/a
43	REST	chr3:195808760-195809278	SK-N-SH	brain:	n/a	chr3:195808826-195808835 chr3:195809118-195809131
44	MAX	chr3:195808189-195809406	H1-hESC	embryonic stem cell:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
45	BRCA1	chr3:195808756-195809215	HepG2	liver:	n/a	n/a
46	JUND	chr3:195808826-195809155	HepG2	liver:	n/a	chr3:195809080-195809089
47	CHD2	chr3:195808462-195809320	HepG2	liver:	n/a	chr3:195809131-195809141 chr3:195809154-195809161
48	CTCF	chr3:195808980-195809230	GM12874	blood:	n/a	chr3:195809166-195809179 chr3:195809010-195809023 chr3:195809013-195809022
49	CTCF	chr3:195809060-195809210	AG04450	lung:	n/a	chr3:195809166-195809179
50	EP300	chr3:195808751-195809319	A549	lung:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:7254466..7255518-chr3:195808392..195809393,4	Hela-S3	cervix:
2	chr19:55895702..55896469-chr3:195808853..195809374,2	HCT-116	colon:
3	chr3:195796379..195810322-chr3:195910077..195926320,43	MCF-7	breast:
4	chr10:75757392..75758317-chr3:195808427..195809368,2	Hela-S3	cervix:
5	chr3:195806834..195810300-chr3:195921968..195927592,7	MCF-7	breast:
6	chr3:195807059..195809798-chr3:196063350..196066594,3	K562	blood:
7	chr3:195808775..195809379-chr8:17104143..17104871,2	HCT-116	colon:
8	chr11:10879074..10879723-chr3:195808529..195809338,2	Hela-S3	cervix:
9	chr3:195807808..195810201-chr5:170814648..170817233,2	MCF-7	breast:
10	chr3:195791142..195792773-chr3:195808257..195810769,2	MCF-7	breast:
11	chr3:195793504..195812987-chr3:195901613..195938073,113	K562	blood:
12	chr3:195808872..195809382-chr6:5260583..5261415,2	Hela-S3	cervix:
13	chr15:67834545..67835150-chr3:195808441..195809425,2	Hela-S3	cervix:
14	chr13:25086337..25087069-chr3:195808572..195809411,2	NB4	blood:
15	chr3:195809070..195810748-chr3:195828208..195830757,2	MCF-7	breast:
16	chr3:195808373..195809995-chr3:196228997..196231632,2	K562	blood:
17	chr3:195807469..195810377-chr3:195942089..195944693,4	MCF-7	breast:
18	chr3:195781940..195789641-chr3:195805045..195810311,11	K562	blood:
19	chr3:195807091..195810537-chr3:195867675..195869638,3	MCF-7	breast:
20	chr11:57435731..57436248-chr3:195808497..195809252,2	Hela-S3	cervix:
21	chr3:195785083..195788008-chr3:195807392..195810078,3	MCF-7	breast:
22	chr10:76586856..76587797-chr3:195808480..195809361,2	HCT-116	colon:
23	chr3:195806658..195811369-chr3:195865432..195872361,14	MCF-7	breast:
24	chr3:195808556..195809153-chr8:102217676..102218553,2	Hela-S3	cervix:
25	chr19:18496590..18497307-chr3:195808657..195809233,2	HCT-116	colon:
26	chr11:73087137..73087958-chr3:195809064..195809637,2	HCT-116	colon:
27	chr3:195808495..195810108-chr3:196228997..196231874,2	K562	blood:
28	chr3:195808781..195809452-chr6:33239324..33239934,2	HCT-116	colon:
29	chr19:49989753..49992423-chr3:195807241..195809770,2	MCF-7	breast:
30	chr3:195635569..195638518-chr3:195807424..195810696,3	MCF-7	breast:
31	chr3:195808627..195809175-chr7:98923008..98923626,2	Hela-S3	cervix:
32	chr3:195794950..195798022-chr3:195807553..195809899,4	MCF-7	breast:
33	chr3:195804323..195810515-chr3:195865435..195874009,30	K562	blood:
34	chr22:43011129..43011751-chr3:195808419..195809137,2	Hela-S3	cervix:
35	chr3:195790520..195792759-chr3:195806929..195809899,2	MCF-7	breast:
36	chr3:195806535..195810385-chr3:195863612..195875110,36	K562	blood:
37	chr3:195808637..195809137-chr5:5422480..5423226,2	Hela-S3	cervix:
38	chr3:195793504..195812415-chr3:195915832..195927942,46	K562	blood:

Variant related genes	Relation type
TFRC	TF binding region
ENSG00000233493	Chromatin interaction
ENSG00000163958	Chromatin interaction
ENSG00000102699	Chromatin interaction
ENSG00000156650	Chromatin interaction
ENSG00000163961	Chromatin interaction
ENSG00000142541	Chromatin interaction
ENSG00000213859	Chromatin interaction
ENSG00000181163	Chromatin interaction
ENSG00000270022	Chromatin interaction
ENSG00000145107	Chromatin interaction
ENSG00000137764	Chromatin interaction
ENSG00000273331	Chromatin interaction
ENSG00000145982	Chromatin interaction
ENSG00000130513	Chromatin interaction
ENSG00000072274	Chromatin interaction
ENSG00000214113	Chromatin interaction
ENSG00000035403	Chromatin interaction
ENSG00000224652	Chromatin interaction
ENSG00000155975	Chromatin interaction
ENSG00000054967	Chromatin interaction
ENSG00000156599	Chromatin interaction
ENSG00000120963	Chromatin interaction
ENSG00000236287	Chromatin interaction
ENSG00000164151	Chromatin interaction
ENSG00000270964	Chromatin interaction
ENSG00000061938	Chromatin interaction
ENSG00000241685	Chromatin interaction
ENSG00000222335	Chromatin interaction
ENSG00000231500	Chromatin interaction
ENSG00000223501	Chromatin interaction
ENSG00000163959	Chromatin interaction
ENSG00000198791	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2284888	0.88[ASN][1000 genomes]
rs3736651	0.89[ASN][1000 genomes]
rs41298061	0.89[ASN][1000 genomes]
rs4927868	0.92[ASN][1000 genomes]
rs507131	0.88[ASN][1000 genomes]
rs60801726	0.82[ASN][1000 genomes]
rs6793127	0.85[ASN][1000 genomes]
rs926149	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
5	nsv1010395	chr3:195641908-195848264	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
6	nsv532213	chr3:195643944-196063636	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
7	esv1820982	chr3:195651349-195835519	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
8	nsv997797	chr3:195658360-196212958	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
9	nsv878170	chr3:195677895-195871388	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
10	nsv878171	chr3:195677895-195959924	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
11	nsv1008512	chr3:195709662-195974936	Strong transcription Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
12	nsv1002584	chr3:195734933-195910772	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv432543	chr3:195746690-196015690	Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
14	nsv878172	chr3:195751853-195831098	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
15	nsv532214	chr3:195762648-195916068	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
16	nsv1002065	chr3:195769609-195877692	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
17	nsv1009105	chr3:195769609-195984388	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
18	nsv524410	chr3:195776240-195816195	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
19	nsv461130	chr3:195776240-195907653	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
20	nsv593069	chr3:195776240-195907653	Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
21	nsv1005558	chr3:195789462-195919077	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
22	nsv536890	chr3:195789462-195919077	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195806000-195809400	Active TSS	Brain Anterior Caudate	brain
2	chr3:195806200-195809800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr3:195806400-195809200	Active TSS	GM12878-XiMat	blood
4	chr3:195806600-195809400	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr3:195806600-195809600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chr3:195806800-195809200	Active TSS	Placenta	Placenta
7	chr3:195806800-195809400	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr3:195806800-195809400	Active TSS	iPS-20b Cell Line	embryonic stem cell
9	chr3:195807000-195809200	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr3:195807000-195809200	Active TSS	iPS-15b Cell Line	embryonic stem cell
11	chr3:195807000-195809200	Active TSS	Duodenum Mucosa	Duodenum
12	chr3:195807000-195809200	Active TSS	Right Ventricle	heart
13	chr3:195807000-195809400	Active TSS	A549	lung
14	chr3:195807000-195809400	Active TSS	K562	blood
15	chr3:195807000-195809600	Active TSS	Colonic Mucosa	Colon
16	chr3:195807200-195809200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr3:195807200-195809200	Active TSS	Hela-S3	cervix
18	chr3:195807200-195809400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr3:195807200-195809400	Active TSS	H9 Cell Line	embryonic stem cell
20	chr3:195807200-195809400	Active TSS	Psoas Muscle	Psoas
21	chr3:195807400-195809200	Active TSS	Primary T regulatory cells fromperipheralblood	blood
22	chr3:195807400-195809200	Active TSS	Esophagus	oesophagus
23	chr3:195807400-195809400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
24	chr3:195807400-195809400	Active TSS	Ovary	ovary
25	chr3:195807400-195809400	Active TSS	Sigmoid Colon	Sigmoid Colon
26	chr3:195807400-195809800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
27	chr3:195807400-195809800	Active TSS	Pancreatic Islets	Pancreatic Islet
28	chr3:195807600-195809200	Active TSS	H1 Cell Line	embryonic stem cell
29	chr3:195807600-195809200	Active TSS	HUES6 Cell Line	embryonic stem cell
30	chr3:195807600-195809200	Active TSS	iPS-18 Cell Line	embryonic stem cell
31	chr3:195807600-195809200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr3:195807600-195809200	Active TSS	Breast Myoepithelial Primary Cells	Breast
33	chr3:195807600-195809200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr3:195807600-195809200	Active TSS	Aorta	Aorta
35	chr3:195807600-195809200	Active TSS	Small Intestine	intestine
36	chr3:195807600-195809200	Active TSS	HMEC	breast
37	chr3:195807600-195809200	Active TSS	NHEK	skin
38	chr3:195807600-195809400	Active TSS	Fetal Kidney	kidney
39	chr3:195807600-195809400	Active TSS	Lung	lung
40	chr3:195807600-195809600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
41	chr3:195807800-195809200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr3:195807800-195809200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr3:195807800-195809200	Active TSS	Primary hematopoietic stem cells short term culture	blood
44	chr3:195807800-195809200	Active TSS	Muscle Satellite Cultured Cells	--
45	chr3:195807800-195809200	Active TSS	HSMM	muscle
46	chr3:195807800-195809200	Active TSS	HSMMtube	muscle
47	chr3:195807800-195809200	Active TSS	NHDF-Ad	bronchial
48	chr3:195807800-195809200	Active TSS	NHLF	lung
49	chr3:195807800-195809400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr3:195807800-195809400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links