Variant report

Variant	rs3829835
Chromosome Location	chr2:46925789-46925790
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:46925418-46926670	HUVEC	blood vessel:	n/a	n/a
2	E2F6	chr2:46925481-46926279	A549	lung:	n/a	chr2:46926147-46926162 chr2:46925661-46925670
3	POLR2A	chr2:46925541-46926253	GM12892	blood:	n/a	n/a
4	POLR2A	chr2:46925489-46926237	A549	lung:	n/a	n/a
5	BACH1	chr2:46925618-46926112	H1-hESC	embryonic stem cell:	n/a	n/a
6	MAZ	chr2:46925281-46926947	K562	blood:	n/a	chr2:46925915-46925924 chr2:46925914-46925925 chr2:46926001-46926010 chr2:46925914-46925923 chr2:46925913-46925926 chr2:46925913-46925926 chr2:46925571-46925581 chr2:46925914-46925925 chr2:46926003-46926012 chr2:46925915-46925924 chr2:46925915-46925924 chr2:46926002-46926013
7	CREB1	chr2:46925519-46926608	H1-hESC	embryonic stem cell:	n/a	n/a
8	FOSL2	chr2:46924693-46926291	HepG2	liver:	n/a	chr2:46925640-46925647 chr2:46925638-46925647
9	SIX5	chr2:46925262-46926233	A549	lung:	n/a	n/a
10	MAX	chr2:46925655-46926931	HepG2	liver:	n/a	chr2:46925915-46925924 chr2:46925914-46925925 chr2:46926001-46926010 chr2:46925914-46925923 chr2:46925913-46925926 chr2:46925913-46925926 chr2:46925914-46925925 chr2:46926003-46926012 chr2:46925915-46925924 chr2:46925915-46925924 chr2:46926002-46926013
11	POLR2A	chr2:46925418-46926823	MCF-7	breast:	n/a	n/a
12	TEAD4	chr2:46924885-46926138	HepG2	liver:	n/a	n/a
13	JUND	chr2:46925385-46926988	GM12878	blood:	n/a	chr2:46925637-46925648 chr2:46925640-46925647 chr2:46925638-46925647 chr2:46926567-46926576
14	YY1	chr2:46925779-46926311	A549	lung:	n/a	chr2:46926086-46926096 chr2:46926085-46926093 chr2:46926074-46926096
15	ATF3	chr2:46925628-46926257	H1-hESC	embryonic stem cell:	n/a	chr2:46925661-46925670
16	ELK1	chr2:46925592-46926114	GM12878	blood:	n/a	n/a
17	BRCA1	chr2:46925405-46926193	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr2:46925703-46925892	H1-hESC	embryonic stem cell:	n/a	n/a
19	EGR1	chr2:46925513-46926374	HCT-116	colon:	n/a	chr2:46926143-46926152 chr2:46926142-46926155
20	PBX3	chr2:46925306-46926690	SK-N-SH	brain:	n/a	n/a
21	POLR2A	chr2:46925429-46926220	PANC-1	pancreas:	n/a	n/a
22	REST	chr2:46925784-46926238	SK-N-SH	brain:	n/a	n/a
23	POLR2A	chr2:46925658-46926212	GM12878	blood:	n/a	n/a
24	RXRA	chr2:46925494-46926193	HepG2	liver:	n/a	n/a
25	SIN3AK20	chr2:46925556-46926152	HepG2	liver:	n/a	n/a
26	YY1	chr2:46925349-46926348	ECC-1	luminal epithelium:	n/a	chr2:46925661-46925670 chr2:46926086-46926096 chr2:46926085-46926093 chr2:46926074-46926096
27	E2F6	chr2:46925748-46926257	K562	blood:	n/a	chr2:46926147-46926162
28	POLR2A	chr2:46925377-46926318	H1-neurons	neurons:	n/a	n/a
29	ATF2	chr2:46925588-46926084	GM12878	blood:	n/a	n/a
30	NFYA	chr2:46925517-46926671	Hela-S3	cervix:	n/a	n/a
31	JUND	chr2:46925492-46926101	HepG2	liver:	n/a	chr2:46925637-46925648 chr2:46925640-46925647 chr2:46925638-46925647
32	MAZ	chr2:46924871-46926829	HepG2	liver:	n/a	chr2:46925915-46925924 chr2:46925914-46925925 chr2:46926001-46926010 chr2:46925914-46925923 chr2:46925913-46925926 chr2:46925913-46925926 chr2:46925571-46925581 chr2:46925914-46925925 chr2:46926003-46926012 chr2:46925915-46925924 chr2:46925915-46925924 chr2:46926002-46926013
33	POLR2A	chr2:46925677-46926174	A549	lung:	n/a	n/a
34	MAFK	chr2:46925622-46926018	HepG2	liver:	n/a	chr2:46925801-46925812
35	PAX5	chr2:46925740-46926323	GM12878	blood:	n/a	chr2:46926245-46926263 chr2:46926244-46926261 chr2:46926244-46926263
36	POLR2A	chr2:46925388-46926186	HepG2	liver:	n/a	n/a
37	POLR2A	chr2:46925506-46926177	A549	lung:	n/a	n/a
38	TEAD4	chr2:46925440-46926272	K562	blood:	n/a	n/a
39	POLR2A	chr2:46925358-46926841	Hela-S3	cervix:	n/a	n/a
40	POLR2A	chr2:46925447-46926878	NB4	blood:	n/a	n/a
41	STAT5A	chr2:46925539-46926080	GM12878	blood:	n/a	chr2:46925639-46925648 chr2:46926036-46926048
42	MAX	chr2:46925513-46926954	Hela-S3	cervix:	n/a	chr2:46925915-46925924 chr2:46925914-46925925 chr2:46926001-46926010 chr2:46925914-46925923 chr2:46925913-46925926 chr2:46925913-46925926 chr2:46925571-46925581 chr2:46925914-46925925 chr2:46926003-46926012 chr2:46925915-46925924 chr2:46925915-46925924 chr2:46926002-46926013
43	ARID3A	chr2:46925574-46925960	K562	blood:	n/a	n/a
44	REST	chr2:46925359-46926253	HL-60	blood:	n/a	n/a
45	WRNIP1	chr2:46925572-46925957	GM12878	blood:	n/a	n/a
46	MAX	chr2:46925507-46926309	H1-hESC	embryonic stem cell:	n/a	chr2:46925915-46925924 chr2:46925914-46925925 chr2:46926001-46926010 chr2:46925914-46925923 chr2:46925913-46925926 chr2:46925913-46925926 chr2:46925571-46925581 chr2:46925914-46925925 chr2:46926003-46926012 chr2:46925915-46925924 chr2:46925915-46925924 chr2:46926002-46926013
47	RFX5	chr2:46925676-46926243	HepG2	liver:	n/a	n/a
48	HEY1	chr2:46925386-46926266	K562	blood:	n/a	n/a
49	IRF3	chr2:46925658-46926269	Hela-S3	cervix:	n/a	chr2:46925660-46925674
50	TAF1	chr2:46925491-46926263	SK-N-SH	brain:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:46925753-46925803	HEK293	kidney:	embryo
2	chr2:46925753-46925803	HRE	kidney:	n/a
3	chr2:46925753-46925803	SK-N-SH_RA	brain:	n/a
4	chr2:46925753-46925803	HAEpiC	amniotic membrane:	n/a
5	chr2:46925753-46925803	BJ	skin:	n/a
6	chr2:46925753-46925803	AG04449	skin:	fetal
7	chr2:46925753-46925803	PANC-1	pancreas:	n/a
8	chr2:46925753-46925803	HepG2	liver:	n/a
9	chr2:46925753-46925803	GM12891	blood:	n/a
10	chr2:46925753-46925803	AG09319	gingival:	n/a
11	chr2:46925753-46925803	CMK	blood:	n/a
12	chr2:46925753-46925803	U87	brain:	n/a
13	chr2:46925753-46925803	HCF	heart:	n/a
14	chr2:46925753-46925803	GM12892	blood:	n/a
15	chr2:46925753-46925803	AG09309	skin:	n/a
16	chr2:46925753-46925803	NH-A	brain:	n/a
17	chr2:46925753-46925803	HCPEpiC	choroid plexus:	n/a
18	chr2:46925753-46925803	IMR90	lung:	fetal
19	chr2:46925753-46925803	A549	lung:	n/a
20	chr2:46925753-46925803	H1-hESC	embryonic stem cell:	embryo
21	chr2:46925753-46925803	SK-N-SH	brain:	n/a
22	chr2:46925753-46925803	HIPEpiC	eye:	n/a
23	chr2:46925753-46925803	PrEC	prostate:	n/a
24	chr2:46925753-46925803	Jurkat	blood:	n/a
25	chr2:46925753-46925803	MCF-7	breast:	n/a
26	chr2:46925753-46925803	ovcar-3	ovarian:	n/a
27	chr2:46925753-46925803	SAEC	small airway:	n/a
28	chr2:46925753-46925803	RPTEC	kidney:	n/a
29	chr2:46925753-46925803	HNPCEpiC	eye:	n/a
30	chr2:46925753-46925803	HRCEpiC	kidney:	n/a
31	chr2:46925753-46925803	AG10803	skin:	n/a
32	chr2:46925753-46925803	HCM	heart:	n/a
33	chr2:46925753-46925803	Caco-2	colon:	n/a
34	chr2:46925753-46925803	GM19239	blood:	n/a
35	chr2:46925753-46925803	Hela-S3	cervix:	n/a
36	chr2:46925753-46925803	NHDF-neo	bronchial:	n/a
37	chr2:46925753-46925803	AoSMC	blood vessel:	n/a
38	chr2:46925753-46925803	HRPEpiC	eye:	n/a
39	chr2:46925753-46925803	NT2-D1	testis:	n/a
40	chr2:46925753-46925803	NHBE	bronchial:	n/a
41	chr2:46925753-46925803	HCT-116	colon:	n/a
42	chr2:46925753-46925803	NB4	blood:	n/a
43	chr2:46925753-46925803	LNCaP	prostate:	n/a
44	chr2:46925753-46925803	GM06990	blood:	n/a
45	chr2:46925753-46925803	T-47D	breast:	n/a
46	chr2:46925753-46925803	ProgFib	skin:	n/a
47	chr2:46925753-46925803	MCF10A-Er-Src	breast:	n/a
48	chr2:46925753-46925803	SK-N-MC	brain:	n/a
49	chr2:46925753-46925803	ECC-1	luminal epithelium:	n/a
50	chr2:46925753-46925803	GM12878	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr2:46925509..46928130-chr2:47135510..47137063,2	MCF-7	breast:
2	chr2:46923183..46926073-chr2:46944483..46946206,2	K562	blood:
3	chr2:46842180..46843861-chr2:46924432..46926384,2	K562	blood:
4	chr2:46916264..46918533-chr2:46923065..46926019,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PIGF-4	chr2:46925253-46925831	NONHSAT070524

Variant related genes	Relation type
SOCS5	TF binding region
SOCS5	CpG island
ENSG00000180398	Chromatin interaction
ENSG00000119878	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1058157	1.00[CEU][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1109380	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11676737	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11695058	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs12474201	1.00[CEU][hapmap];1.00[GIH][hapmap];0.92[MEX][hapmap];0.83[MKK][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12998753	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12998762	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12999586	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13025595	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13025984	1.00[ASW][hapmap];0.95[CEU][hapmap];0.89[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.92[TSI][hapmap];0.83[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13031872	0.84[AMR][1000 genomes]
rs13429704	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17822019	0.86[ASW][hapmap];0.95[CEU][hapmap];0.89[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17822294	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2346878	0.95[CEU][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34401107	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35158352	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35722922	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35825831	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4952842	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4952843	0.80[CEU][hapmap];0.89[CHB][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4953419	0.83[CEU][hapmap];0.94[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.96[MEX][hapmap];0.86[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6738426	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7562173	0.84[CEU][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.83[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7584870	0.89[CHB][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.83[AMR][1000 genomes]
rs7594523	0.95[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs897530	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014425	chr2:46670179-47033417	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv535678	chr2:46670179-47033417	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv873996	chr2:46670941-47065227	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
4	nsv533112	chr2:46800828-46959977	Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	nsv817517	chr2:46819371-47715140	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	152 gene(s)	inside rSNPs	diseases
6	nsv873997	chr2:46821640-46984627	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	esv3365634	chr2:46910377-46929000	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	esv3460455	chr2:46910422-46928955	Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
9	esv3460454	chr2:46910435-46928955	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	esv3460456	chr2:46910436-46928951	Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	esv3343605	chr2:46925273-46927821	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:46924600-46929200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr2:46924800-46925800	Flanking Active TSS	Dnd41	blood
3	chr2:46924800-46928200	Active TSS	Duodenum Smooth Muscle	Duodenum
4	chr2:46925000-46925800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr2:46925000-46925800	Weak transcription	Small Intestine	intestine
6	chr2:46925000-46926000	Flanking Active TSS	K562	blood
7	chr2:46925000-46927200	Active TSS	Brain Inferior Temporal Lobe	brain
8	chr2:46925000-46927200	Active TSS	Duodenum Mucosa	Duodenum
9	chr2:46925000-46928400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr2:46925000-46930000	Active TSS	Breast Myoepithelial Primary Cells	Breast
11	chr2:46925200-46925800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr2:46925200-46925800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
13	chr2:46925200-46925800	Flanking Active TSS	Primary B cells from peripheral blood	blood
14	chr2:46925200-46925800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
15	chr2:46925200-46925800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
16	chr2:46925200-46925800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
17	chr2:46925200-46925800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
18	chr2:46925200-46925800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr2:46925200-46925800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
20	chr2:46925200-46925800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
21	chr2:46925200-46925800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr2:46925200-46925800	Flanking Active TSS	Fetal Muscle Trunk	muscle
23	chr2:46925200-46925800	Flanking Active TSS	Fetal Thymus	thymus
24	chr2:46925200-46925800	Flanking Active TSS	HUVEC	blood vessel
25	chr2:46925200-46925800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
26	chr2:46925200-46925800	Flanking Active TSS	NH-A	brain
27	chr2:46925200-46925800	Flanking Active TSS	NHEK	skin
28	chr2:46925200-46925800	Flanking Active TSS	Osteobl	bone
29	chr2:46925200-46926400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr2:46925200-46927000	Active TSS	Brain Substantia Nigra	brain
31	chr2:46925200-46927200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr2:46925200-46927200	Active TSS	iPS-20b Cell Line	embryonic stem cell
33	chr2:46925200-46927200	Active TSS	Brain Anterior Caudate	brain
34	chr2:46925200-46927200	Active TSS	Brain Germinal Matrix	brain
35	chr2:46925200-46927200	Active TSS	Fetal Adrenal Gland	Adrenal Gland
36	chr2:46925200-46927200	Active TSS	Fetal Brain Female	brain
37	chr2:46925200-46927200	Active TSS	Skeletal Muscle Male	skeletal muscle
38	chr2:46925200-46927400	Active TSS	H9 Cell Line	embryonic stem cell
39	chr2:46925200-46927400	Active TSS	Left Ventricle	heart
40	chr2:46925200-46927600	Active TSS	Primary T killer memory cells from peripheral blood	blood
41	chr2:46925200-46927600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr2:46925200-46927600	Active TSS	Brain Cingulate Gyrus	brain
43	chr2:46925200-46927600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
44	chr2:46925200-46927800	Active TSS	ES-I3 Cell Line	embryonic stem cell
45	chr2:46925200-46928000	Active TSS	Rectal Mucosa Donor 29	rectum
46	chr2:46925200-46928200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr2:46925200-46928400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr2:46925200-46928400	Active TSS	Right Atrium	heart
49	chr2:46925200-46928400	Active TSS	Right Ventricle	heart
50	chr2:46925200-46928800	Active TSS	Pancreatic Islets	Pancreatic Islet

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links