Variant report

Variant	rs3845786
Chromosome Location	chr2:37408313-37408314
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13022403	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4670670	0.83[ASN][1000 genomes]
rs4670671	0.83[ASN][1000 genomes]
rs4670674	0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6706672	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6710046	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6734866	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6748151	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7583355	0.87[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37407200-37409600	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr2:37407400-37408400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr2:37407400-37408400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr2:37407400-37409600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr2:37407400-37409800	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr2:37407400-37410000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr2:37407800-37408600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr2:37407800-37409000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr2:37407800-37409200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr2:37408000-37409600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr2:37408000-37416600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr2:37408200-37409000	Enhancers	HUVEC	blood vessel
13	chr2:37408200-37410600	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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