Variant report

Variant rs3850962
Chromosome Location chr12:30784107-30784108
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:30767000-30784800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr12:30767000-30785600 Weak transcription Pancreas Pancrea
3 chr12:30767000-30844200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr12:30771000-30812200 Weak transcription Aorta Aorta
5 chr12:30771200-30804200 Weak transcription Fetal Brain Male brain
6 chr12:30774600-30812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr12:30775600-30815400 Weak transcription Right Ventricle heart
8 chr12:30775800-30784800 Weak transcription GM12878-XiMat blood
9 chr12:30775800-30813200 Weak transcription HMEC breast
10 chr12:30775800-30815200 Weak transcription NHEK skin
11 chr12:30776000-30808400 Weak transcription Muscle Satellite Cultured Cells --
12 chr12:30776800-30791000 Weak transcription Psoas Muscle Psoas
13 chr12:30778000-30786400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:30779200-30812200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr12:30779400-30796400 Weak transcription H9 Cell Line embryonic stem cell
16 chr12:30779800-30825000 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr12:30780200-30795000 Weak transcription Fetal Intestine Small intestine
18 chr12:30780400-30796200 Weak transcription Hela-S3 cervix
19 chr12:30780600-30785800 Strong transcription Stomach Smooth Muscle stomach
20 chr12:30780600-30788400 Strong transcription Duodenum Smooth Muscle Duodenum
21 chr12:30780800-30784800 Strong transcription Osteobl bone
22 chr12:30780800-30786000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:30780800-30786000 Strong transcription Fetal Muscle Leg muscle
24 chr12:30780800-30786200 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr12:30780800-30792600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr12:30780800-30793000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr12:30780800-30793000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr12:30780800-30793200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr12:30780800-30793200 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr12:30780800-30847000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr12:30781000-30787200 Strong transcription Fetal Intestine Large intestine
32 chr12:30781000-30792800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr12:30781000-30792800 Strong transcription Primary T cells from cord blood blood
34 chr12:30781000-30793000 Strong transcription Liver Liver
35 chr12:30781200-30784800 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr12:30781200-30785200 Strong transcription iPS-18 Cell Line embryonic stem cell
37 chr12:30781200-30786000 Strong transcription Left Ventricle heart
38 chr12:30781200-30786400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:30781200-30786800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:30781200-30787200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr12:30781200-30787200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr12:30781200-30787200 Strong transcription Rectal Smooth Muscle rectum
43 chr12:30781200-30787200 Strong transcription Skeletal Muscle Female skeletal muscle
44 chr12:30781200-30790000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:30781200-30790200 Strong transcription Duodenum Mucosa Duodenum
46 chr12:30781200-30792800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr12:30781200-30792800 Strong transcription Primary B cells from peripheral blood blood
48 chr12:30781200-30792800 Strong transcription Adipose Nuclei Adipose
49 chr12:30781200-30792800 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr12:30781200-30793000 Strong transcription Primary neutrophils fromperipheralblood blood

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