Variant report

Variant	rs3864173
Chromosome Location	chr4:174052829-174052830
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1454	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17059207	0.82[JPT][hapmap]
rs2877749	0.82[JPT][hapmap]
rs3864172	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4048410	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4608791	0.82[JPT][hapmap]
rs6553677	0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6553686	0.82[JPT][hapmap]
rs6828429	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6852169	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7670064	0.83[GIH][hapmap];0.82[JPT][hapmap]
rs9684166	0.82[JPT][hapmap]
rs9685410	0.82[JPT][hapmap]
rs9993327	0.82[JPT][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174042600-174069000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:174047000-174079000	Weak transcription	Fetal Thymus	thymus
3	chr4:174050600-174053200	Weak transcription	K562	blood
4	chr4:174052000-174056000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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