The 2.0 version of rSNPBase

Variant report

Variant rs3916483
Chromosome Location chr1:95358381-95358382
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95329000-95385000 Weak transcription Colonic Mucosa Colon
2 chr1:95333200-95370000 Weak transcription Small Intestine intestine
3 chr1:95340200-95361200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:95343400-95361400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:95348400-95360200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:95348800-95360800 Weak transcription Lung lung
7 chr1:95349800-95359800 Weak transcription HUVEC blood vessel
8 chr1:95349800-95364200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:95350000-95360800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:95350200-95358400 Weak transcription Stomach Mucosa stomach
11 chr1:95350200-95361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:95350200-95361000 Weak transcription Adipose Nuclei Adipose
13 chr1:95350200-95361000 Weak transcription Fetal Heart heart
14 chr1:95350200-95361400 Weak transcription A549 lung
15 chr1:95350400-95358400 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:95350400-95359800 Weak transcription Rectal Smooth Muscle rectum
17 chr1:95350400-95359800 Weak transcription NHDF-Ad bronchial
18 chr1:95350400-95360400 Weak transcription Fetal Kidney kidney
19 chr1:95350400-95360600 Weak transcription Brain Cingulate Gyrus brain
20 chr1:95350400-95360600 Weak transcription Brain Germinal Matrix brain
21 chr1:95350400-95360800 Weak transcription Esophagus oesophagus
22 chr1:95350400-95361000 Weak transcription Aorta Aorta
23 chr1:95350400-95361000 Weak transcription Colon Smooth Muscle Colon
24 chr1:95350400-95361000 Weak transcription Fetal Lung lung
25 chr1:95350400-95361200 Weak transcription Fetal Brain Male brain
26 chr1:95350400-95368800 Weak transcription Spleen Spleen
27 chr1:95350400-95378200 Weak transcription Brain Angular Gyrus brain
28 chr1:95351200-95359600 Weak transcription HepG2 liver
29 chr1:95351200-95360400 Weak transcription Brain Hippocampus Middle brain
30 chr1:95351200-95360400 Weak transcription Brain Substantia Nigra brain
31 chr1:95351400-95361200 Weak transcription Brain Anterior Caudate brain
32 chr1:95351800-95360200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:95351800-95360800 Weak transcription Stomach Smooth Muscle stomach
34 chr1:95352000-95361200 Weak transcription Right Ventricle heart
35 chr1:95352400-95361200 Weak transcription Ovary ovary
36 chr1:95353200-95360600 Weak transcription Fetal Brain Female brain
37 chr1:95353400-95373600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:95353600-95360600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:95353600-95361200 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:95353800-95360800 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr1:95353800-95363400 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:95353800-95373600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:95354200-95359800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr1:95354400-95358400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:95354600-95367800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:95354800-95360000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:95354800-95360400 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr1:95354800-95361000 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:95355000-95360400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:95355000-95375200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015