The 2.0 version of rSNPBase

Variant report

Variant rs6661181
Chromosome Location chr1:95352564-95352565
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95329000-95385000 Weak transcription Colonic Mucosa Colon
2 chr1:95333200-95370000 Weak transcription Small Intestine intestine
3 chr1:95340200-95361200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:95342600-95356000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:95343400-95361400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:95344600-95356000 Weak transcription Duodenum Mucosa Duodenum
7 chr1:95346400-95353800 Strong transcription Fetal Intestine Small intestine
8 chr1:95347800-95354800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr1:95348000-95354400 Enhancers Cortex derived primary cultured neurospheres brain
10 chr1:95348400-95360200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:95348800-95354800 Enhancers H1 Cell Line embryonic stem cell
12 chr1:95348800-95354800 Enhancers Fetal Muscle Leg muscle
13 chr1:95348800-95360800 Weak transcription Lung lung
14 chr1:95349000-95357800 Weak transcription Pancreas Pancrea
15 chr1:95349800-95359800 Weak transcription HUVEC blood vessel
16 chr1:95349800-95364200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:95350000-95356800 Weak transcription Liver Liver
18 chr1:95350000-95357800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:95350000-95357800 Weak transcription Left Ventricle heart
20 chr1:95350000-95360800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:95350200-95356600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:95350200-95358400 Weak transcription Stomach Mucosa stomach
23 chr1:95350200-95361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:95350200-95361000 Weak transcription Adipose Nuclei Adipose
25 chr1:95350200-95361000 Weak transcription Fetal Heart heart
26 chr1:95350200-95361400 Weak transcription A549 lung
27 chr1:95350400-95354600 Weak transcription HMEC breast
28 chr1:95350400-95355800 Weak transcription HSMM muscle
29 chr1:95350400-95356000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:95350400-95356000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:95350400-95356000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:95350400-95356600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:95350400-95356600 Weak transcription Osteobl bone
34 chr1:95350400-95357400 Weak transcription NH-A brain
35 chr1:95350400-95357800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:95350400-95358000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:95350400-95358400 Weak transcription Placenta Amnion Placenta Amnion
38 chr1:95350400-95359800 Weak transcription Rectal Smooth Muscle rectum
39 chr1:95350400-95359800 Weak transcription NHDF-Ad bronchial
40 chr1:95350400-95360400 Weak transcription Fetal Kidney kidney
41 chr1:95350400-95360600 Weak transcription Brain Cingulate Gyrus brain
42 chr1:95350400-95360600 Weak transcription Brain Germinal Matrix brain
43 chr1:95350400-95360800 Weak transcription Esophagus oesophagus
44 chr1:95350400-95361000 Weak transcription Aorta Aorta
45 chr1:95350400-95361000 Weak transcription Colon Smooth Muscle Colon
46 chr1:95350400-95361000 Weak transcription Fetal Lung lung
47 chr1:95350400-95361200 Weak transcription Fetal Brain Male brain
48 chr1:95350400-95368800 Weak transcription Spleen Spleen
49 chr1:95350400-95378200 Weak transcription Brain Angular Gyrus brain
50 chr1:95350600-95358200 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015