The 2.0 version of rSNPBase

Variant report

Variant rs9432615
Chromosome Location chr1:95373842-95373843
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95329000-95385000 Weak transcription Colonic Mucosa Colon
2 chr1:95350400-95378200 Weak transcription Brain Angular Gyrus brain
3 chr1:95355000-95375200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:95356200-95375000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:95357800-95390800 Weak transcription Primary hematopoietic stem cells blood
6 chr1:95360200-95375000 Weak transcription Psoas Muscle Psoas
7 chr1:95360400-95378400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:95361400-95379600 Weak transcription Esophagus oesophagus
9 chr1:95363600-95377200 Weak transcription Gastric stomach
10 chr1:95364000-95388600 Weak transcription Fetal Brain Male brain
11 chr1:95364400-95375000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:95364800-95384800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:95365600-95375400 Weak transcription Brain Germinal Matrix brain
14 chr1:95367800-95375600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:95367800-95376200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:95368400-95388400 Weak transcription Fetal Intestine Large intestine
17 chr1:95368400-95390600 Weak transcription Fetal Thymus thymus
18 chr1:95368800-95374000 Genic enhancers Breast Myoepithelial Primary Cells Breast
19 chr1:95369000-95378400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:95369000-95388200 Weak transcription Fetal Brain Female brain
21 chr1:95369200-95376200 Weak transcription Brain Substantia Nigra brain
22 chr1:95369200-95378000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:95369400-95375200 Weak transcription Brain Hippocampus Middle brain
24 chr1:95369600-95374800 Weak transcription A549 lung
25 chr1:95369600-95375000 Weak transcription Fetal Heart heart
26 chr1:95369600-95378000 Weak transcription Brain Anterior Caudate brain
27 chr1:95370400-95377800 Weak transcription Small Intestine intestine
28 chr1:95370800-95375000 Weak transcription Right Ventricle heart
29 chr1:95370800-95375000 Weak transcription HMEC breast
30 chr1:95370800-95378000 Weak transcription Aorta Aorta
31 chr1:95371000-95375000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:95371000-95375200 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:95371000-95377800 Weak transcription Adipose Nuclei Adipose
34 chr1:95371000-95379600 Weak transcription Pancreas Pancrea
35 chr1:95371200-95375200 Weak transcription Right Atrium heart
36 chr1:95371400-95374800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:95371400-95375400 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr1:95371400-95377200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:95371800-95376600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:95372200-95374000 Strong transcription Liver Liver
41 chr1:95372200-95375000 Strong transcription Muscle Satellite Cultured Cells --
42 chr1:95372200-95375000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:95372200-95375000 Genic enhancers NHLF lung
44 chr1:95372400-95374000 Strong transcription HSMM muscle
45 chr1:95372400-95374000 Genic enhancers Osteobl bone
46 chr1:95372400-95375000 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:95372400-95375200 Weak transcription Rectal Smooth Muscle rectum
48 chr1:95372600-95374000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:95372600-95376200 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:95372600-95377800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015