The 2.0 version of rSNPBase

Variant report

Variant rs11809155
Chromosome Location chr1:95401359-95401360
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95393400-95401800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:95393600-95404000 Weak transcription Primary hematopoietic stem cells blood
3 chr1:95394000-95415600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:95395400-95401800 Weak transcription Brain Anterior Caudate brain
5 chr1:95395400-95404000 Weak transcription Brain Angular Gyrus brain
6 chr1:95395400-95410400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:95395600-95401400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:95395600-95401400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:95395600-95401400 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:95395600-95401800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:95395600-95401800 Weak transcription Colon Smooth Muscle Colon
12 chr1:95395600-95401800 Weak transcription Lung lung
13 chr1:95395600-95401800 Weak transcription Rectal Smooth Muscle rectum
14 chr1:95395600-95401800 Weak transcription NHLF lung
15 chr1:95395600-95402000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:95395600-95403400 Weak transcription Right Atrium heart
17 chr1:95395600-95403800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:95395600-95403800 Weak transcription Gastric stomach
19 chr1:95395600-95403800 Weak transcription Right Ventricle heart
20 chr1:95395600-95404200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:95395600-95407000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:95395600-95412400 Weak transcription Colonic Mucosa Colon
23 chr1:95395600-95412400 Weak transcription Pancreas Pancrea
24 chr1:95395600-95416400 Weak transcription Brain Hippocampus Middle brain
25 chr1:95395800-95401400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr1:95395800-95401800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:95395800-95408600 Weak transcription Brain Cingulate Gyrus brain
28 chr1:95396000-95403200 Weak transcription Small Intestine intestine
29 chr1:95396000-95407800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:95396200-95401800 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:95396200-95401800 Weak transcription Fetal Lung lung
32 chr1:95397400-95401800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:95398800-95401800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:95399200-95401400 Enhancers Brain Germinal Matrix brain
35 chr1:95399200-95401400 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:95399200-95404000 Weak transcription Adipose Nuclei Adipose
37 chr1:95399400-95401400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:95399400-95401400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:95399400-95401600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:95399400-95401600 Weak transcription Aorta Aorta
41 chr1:95399400-95401800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:95399400-95401800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:95399400-95401800 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:95399400-95402400 Weak transcription HepG2 liver
45 chr1:95399400-95402600 Weak transcription Liver Liver
46 chr1:95399400-95403800 Weak transcription Left Ventricle heart
47 chr1:95399400-95412200 Weak transcription Stomach Smooth Muscle stomach
48 chr1:95399400-95412400 Weak transcription Fetal Stomach stomach
49 chr1:95399400-95415400 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:95399400-95418800 Weak transcription Ovary ovary

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Last update: Aug 31, 2015