The 2.0 version of rSNPBase

Variant report

Variant rs74101955
Chromosome Location chr1:95455346-95455347
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
2 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:95437800-95458400 Weak transcription Liver Liver
4 chr1:95446800-95457800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
6 chr1:95447600-95460400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
8 chr1:95448800-95460000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:95449000-95455400 Weak transcription Brain Angular Gyrus brain
10 chr1:95449000-95458600 Weak transcription Right Ventricle heart
11 chr1:95449000-95460800 Weak transcription Fetal Kidney kidney
12 chr1:95449200-95455400 Weak transcription Fetal Heart heart
13 chr1:95450600-95460000 Weak transcription Fetal Lung lung
14 chr1:95451800-95457200 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr1:95452600-95467000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:95452800-95459200 Weak transcription Aorta Aorta
17 chr1:95452800-95460000 Weak transcription Primary T cells from cord blood blood
18 chr1:95452800-95468400 Weak transcription Fetal Intestine Small intestine
19 chr1:95453200-95463200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:95453600-95459200 Weak transcription Adipose Nuclei Adipose
21 chr1:95453600-95468400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:95453800-95459200 Weak transcription Spleen Spleen
23 chr1:95454000-95459200 Weak transcription Osteobl bone
24 chr1:95454000-95467600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:95454200-95459200 Weak transcription NH-A brain
26 chr1:95454200-95460200 Weak transcription Lung lung
27 chr1:95454400-95458400 Weak transcription HepG2 liver
28 chr1:95454800-95455400 Enhancers Skeletal Muscle Male skeletal muscle
29 chr1:95454800-95456200 Enhancers Muscle Satellite Cultured Cells --
30 chr1:95454800-95456200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:95455000-95455400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:95455000-95455400 Flanking Active TSS HSMMtube muscle
33 chr1:95455000-95455600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:95455000-95455600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:95455000-95455600 Enhancers Brain Hippocampus Middle brain
36 chr1:95455000-95455600 Enhancers Fetal Stomach stomach
37 chr1:95455000-95455600 Enhancers Left Ventricle heart
38 chr1:95455000-95455600 Enhancers Pancreas Pancrea
39 chr1:95455000-95455600 Enhancers Right Atrium heart
40 chr1:95455000-95455600 Enhancers Stomach Mucosa stomach
41 chr1:95455000-95455800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:95455000-95455800 Enhancers Fetal Muscle Trunk muscle
43 chr1:95455000-95455800 Enhancers Rectal Smooth Muscle rectum
44 chr1:95455000-95455800 Enhancers Sigmoid Colon Sigmoid Colon
45 chr1:95455000-95456000 Enhancers Cortex derived primary cultured neurospheres brain
46 chr1:95455000-95456000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:95455000-95456000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:95455000-95456200 Enhancers Fetal Muscle Leg muscle
49 chr1:95455000-95456200 Enhancers HUVEC blood vessel
50 chr1:95455200-95473600 Weak transcription Gastric stomach

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Last update: Aug 31, 2015