The 2.0 version of rSNPBase

Variant report

Variant rs59569067
Chromosome Location chr1:95485195-95485196
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
2 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
3 chr1:95469200-95487200 Weak transcription Small Intestine intestine
4 chr1:95476000-95490800 Weak transcription Primary T cells from cord blood blood
5 chr1:95478800-95485600 Enhancers HepG2 liver
6 chr1:95480000-95487000 Weak transcription Brain Angular Gyrus brain
7 chr1:95480000-95508800 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:95480200-95487000 Weak transcription HUVEC blood vessel
9 chr1:95480200-95487200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:95480200-95487200 Weak transcription Ovary ovary
11 chr1:95480200-95490600 Weak transcription Liver Liver
12 chr1:95480600-95487200 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:95480600-95487800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:95480600-95488000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:95480600-95491400 Weak transcription Fetal Intestine Small intestine
16 chr1:95480800-95490800 Weak transcription Left Ventricle heart
17 chr1:95481000-95487000 Weak transcription Fetal Brain Male brain
18 chr1:95481400-95486600 Weak transcription Brain Anterior Caudate brain
19 chr1:95481400-95486800 Weak transcription Brain Hippocampus Middle brain
20 chr1:95481800-95486600 Weak transcription Colon Smooth Muscle Colon
21 chr1:95482400-95487400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:95482800-95485200 Enhancers HSMMtube muscle
23 chr1:95483000-95487000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:95483400-95485200 Enhancers NHLF lung
25 chr1:95483400-95487400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:95483600-95485200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:95484000-95485200 Enhancers Fetal Lung lung
28 chr1:95484000-95487200 Weak transcription Pancreas Pancrea
29 chr1:95484000-95491000 Weak transcription Psoas Muscle Psoas
30 chr1:95484200-95485200 Enhancers Fetal Heart heart
31 chr1:95484200-95485200 Enhancers A549 lung
32 chr1:95484200-95488800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:95484400-95486400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:95484400-95486800 Weak transcription Fetal Muscle Leg muscle
35 chr1:95484600-95486400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:95484600-95486600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:95484600-95486800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:95484600-95487000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:95484600-95489000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:95484600-95491000 Weak transcription Thymus Thymus
41 chr1:95484600-95495000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:95484800-95486400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:95484800-95486400 Weak transcription HMEC breast
44 chr1:95484800-95486600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:95484800-95486600 Weak transcription Rectal Smooth Muscle rectum
46 chr1:95484800-95486600 Weak transcription NH-A brain
47 chr1:95484800-95486600 Weak transcription NHEK skin
48 chr1:95484800-95486600 Weak transcription Osteobl bone
49 chr1:95484800-95487200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:95484800-95487200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015