The 2.0 version of rSNPBase

Variant report

Variant rs61488063
Chromosome Location chr1:95494122-95494123
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95480000-95508800 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr1:95484600-95495000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:95484800-95494600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:95485000-95500400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:95485200-95507000 Weak transcription Fetal Heart heart
6 chr1:95486600-95494600 Weak transcription HepG2 liver
7 chr1:95487400-95494600 Weak transcription Esophagus oesophagus
8 chr1:95488000-95507000 Weak transcription Ovary ovary
9 chr1:95488200-95499400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:95488200-95505400 Weak transcription Pancreas Pancrea
11 chr1:95488200-95507000 Weak transcription Rectal Smooth Muscle rectum
12 chr1:95488200-95537600 Weak transcription Right Ventricle heart
13 chr1:95488400-95494200 Weak transcription Brain Anterior Caudate brain
14 chr1:95488400-95494800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:95488400-95507000 Weak transcription Brain Angular Gyrus brain
16 chr1:95488400-95507800 Weak transcription Brain Substantia Nigra brain
17 chr1:95488600-95507800 Weak transcription Colon Smooth Muscle Colon
18 chr1:95488800-95494400 Weak transcription Primary B cells from peripheral blood blood
19 chr1:95488800-95505400 Weak transcription Small Intestine intestine
20 chr1:95489400-95517200 Weak transcription Aorta Aorta
21 chr1:95489800-95494200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:95489800-95499600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:95490000-95494600 Weak transcription NHEK skin
24 chr1:95490200-95494600 Weak transcription GM12878-XiMat blood
25 chr1:95491200-95494400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:95491400-95494400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:95491400-95494400 Weak transcription Adipose Nuclei Adipose
28 chr1:95491400-95494400 Weak transcription Thymus Thymus
29 chr1:95491400-95494600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:95491400-95494600 Weak transcription Brain Germinal Matrix brain
31 chr1:95491400-95494600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:95491400-95494600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr1:95491400-95495200 Weak transcription Primary B cells from cord blood blood
34 chr1:95491400-95503600 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:95491400-95507000 Weak transcription Fetal Kidney kidney
36 chr1:95491600-95494600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:95491600-95496200 Weak transcription Left Ventricle heart
38 chr1:95491600-95529600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:95491800-95494600 Weak transcription Psoas Muscle Psoas
40 chr1:95492200-95494200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:95492400-95494600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:95492400-95494600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:95492600-95494600 Weak transcription Fetal Muscle Leg muscle
44 chr1:95492600-95495000 Weak transcription Duodenum Mucosa Duodenum
45 chr1:95492600-95497200 Weak transcription Brain Hippocampus Middle brain
46 chr1:95492600-95507800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr1:95492800-95494200 Weak transcription Fetal Intestine Small intestine
48 chr1:95492800-95494400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:95492800-95494400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:95492800-95494400 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015