Variant report

Variant	rs74101972
Chromosome Location	chr1:95477926-95477927
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs41292697	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56032536	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56204307	0.91[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs57040913	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57093304	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57122039	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57213707	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57950891	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59130528	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59338711	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59569067	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60405904	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60491236	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60549805	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60555923	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs60757816	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61488063	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61772226	0.91[AFR][1000 genomes]
rs61774271	0.91[AFR][1000 genomes]
rs74101940	0.81[EUR][1000 genomes]
rs74101946	0.81[EUR][1000 genomes]
rs74101955	0.81[EUR][1000 genomes]
rs74101957	0.87[EUR][1000 genomes]
rs74101958	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101961	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101968	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74101979	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101983	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101989	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101991	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101993	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101995	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101996	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101998	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74101999	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74102002	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103604	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103606	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103607	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103608	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103627	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103628	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103629	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103634	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs74103644	0.91[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs74103651	0.91[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs74103654	0.91[AFR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95447000-95490800	Weak transcription	Fetal Intestine Large	intestine
2	chr1:95448200-95491000	Weak transcription	Primary B cells from cord blood	blood
3	chr1:95460400-95478400	Weak transcription	Left Ventricle	heart
4	chr1:95468600-95482400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:95468800-95479600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr1:95469000-95479600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr1:95469200-95478000	Weak transcription	Ovary	ovary
8	chr1:95469200-95479600	Weak transcription	Fetal Intestine Small	intestine
9	chr1:95469200-95487200	Weak transcription	Small Intestine	intestine
10	chr1:95469400-95478800	Weak transcription	HepG2	liver
11	chr1:95472400-95478000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr1:95473000-95478200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr1:95473400-95478000	Weak transcription	HSMMtube	muscle
14	chr1:95473400-95479800	Weak transcription	Pancreas	Pancrea
15	chr1:95473600-95481200	Weak transcription	Aorta	Aorta
16	chr1:95473800-95479200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr1:95476000-95490800	Weak transcription	Primary T cells from cord blood	blood
18	chr1:95476800-95479200	Weak transcription	Liver	Liver
19	chr1:95477600-95478600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr1:95477600-95480000	Enhancers	HSMM	muscle
21	chr1:95477800-95478200	Weak transcription	NHLF	lung
22	chr1:95477800-95478600	Enhancers	Brain Inferior Temporal Lobe	brain
23	chr1:95477800-95479600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr1:95477800-95480000	Enhancers	Muscle Satellite Cultured Cells	--
25	chr1:95477800-95480000	Enhancers	Osteobl	bone
26	chr1:95477800-95480200	Enhancers	NHDF-Ad	bronchial

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