Variant report

Variant	rs3964250
Chromosome Location	chr6:69371437-69371438
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	esv3350874	chr6:69370256-69372654	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3338551	chr6:69370681-69372129	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv349406	chr6:69371385-69371450	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69352200-69399000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr6:69364200-69399800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:69365800-69377400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:69367400-69371800	Weak transcription	Brain Angular Gyrus	brain
5	chr6:69367600-69377600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr6:69367800-69371600	Weak transcription	Fetal Lung	lung
7	chr6:69368400-69371800	Weak transcription	Brain Anterior Caudate	brain
8	chr6:69368400-69377800	Weak transcription	Brain Cingulate Gyrus	brain
9	chr6:69368600-69376000	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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