Variant report

Variant	rs398046042
Chromosome Location	chr10:61355744-61355745
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895565	chr10:61347537-61379398	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv895566	chr10:61350192-61379398	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv437684	chr10:61354446-61367720	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv437683	chr10:61354446-61369980	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	esv1385689	chr10:61355743-61355744	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61355000-61356000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:61355000-61356000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:61355000-61356000	Enhancers	Colon Smooth Muscle	Colon
4	chr10:61355200-61356000	Enhancers	Hela-S3	cervix
5	chr10:61355200-61356400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr10:61355400-61355800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr10:61355600-61366800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links