The 2.0 version of rSNPBase

Variant report

Variant rs4027038
Chromosome Location chr1:211914731-211914732
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211907000-211920800 Weak transcription Aorta Aorta
2 chr1:211908800-211920800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:211908800-211920800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:211909200-211920200 Weak transcription Fetal Intestine Large intestine
5 chr1:211909200-211922200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:211909400-211920800 Weak transcription Pancreas Pancrea
7 chr1:211909400-211921000 Weak transcription Duodenum Mucosa Duodenum
8 chr1:211909400-211921600 Weak transcription Fetal Intestine Small intestine
9 chr1:211909400-211939200 Weak transcription Ovary ovary
10 chr1:211909600-211921400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:211909600-211922000 Weak transcription Placenta Placenta
12 chr1:211909600-211922400 Weak transcription HSMM muscle
13 chr1:211909600-211923600 Weak transcription NHDF-Ad bronchial
14 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
15 chr1:211909800-211915000 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:211909800-211919200 Enhancers Brain Hippocampus Middle brain
17 chr1:211909800-211919400 Enhancers Brain Cingulate Gyrus brain
18 chr1:211909800-211920000 Weak transcription Adipose Nuclei Adipose
19 chr1:211909800-211921400 Weak transcription HSMMtube muscle
20 chr1:211909800-211922200 Weak transcription HUVEC blood vessel
21 chr1:211910000-211915000 Weak transcription Hela-S3 cervix
22 chr1:211910200-211915600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:211910800-211914800 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr1:211911200-211917400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:211911200-211920200 Weak transcription Fetal Muscle Leg muscle
26 chr1:211911200-211920800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:211911400-211920200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:211911800-211921000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:211911800-211927400 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:211912400-211915000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:211912400-211915600 Weak transcription NH-A brain
32 chr1:211912400-211920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:211912400-211922000 Weak transcription Brain Germinal Matrix brain
34 chr1:211912400-211922000 Weak transcription Right Ventricle heart
35 chr1:211912400-211925600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:211912600-211920800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:211912600-211920800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:211912600-211920800 Weak transcription Fetal Stomach stomach
39 chr1:211912600-211920800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:211912600-211921000 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:211912600-211921800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:211912600-211964600 Weak transcription NHEK skin
43 chr1:211912800-211920400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:211912800-211970200 Weak transcription HMEC breast
45 chr1:211913200-211915000 Weak transcription Brain Angular Gyrus brain
46 chr1:211913200-211920200 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr1:211913200-211920800 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:211913400-211916200 Weak transcription K562 blood
49 chr1:211913400-211917000 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr1:211913400-211919400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015