The 2.0 version of rSNPBase

Variant report

Variant rs7544941
Chromosome Location chr1:212125154-212125155
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212103000-212132600 Weak transcription Gastric stomach
2 chr1:212103600-212132200 Weak transcription Esophagus oesophagus
3 chr1:212103800-212132200 Weak transcription NHLF lung
4 chr1:212106200-212148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:212106400-212132400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:212106400-212132600 Weak transcription Right Ventricle heart
7 chr1:212106400-212147800 Weak transcription NH-A brain
8 chr1:212107000-212132800 Weak transcription Pancreas Pancrea
9 chr1:212108000-212132400 Weak transcription Spleen Spleen
10 chr1:212109200-212132800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:212112000-212132200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:212112000-212170200 Weak transcription Small Intestine intestine
13 chr1:212112400-212132200 Weak transcription Rectal Smooth Muscle rectum
14 chr1:212112400-212132800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:212112400-212133000 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:212112400-212148600 Weak transcription NHDF-Ad bronchial
17 chr1:212112600-212132200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:212112600-212133600 Weak transcription Brain Hippocampus Middle brain
19 chr1:212112600-212148200 Weak transcription Colon Smooth Muscle Colon
20 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:212113400-212126600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:212113600-212138600 Weak transcription Fetal Kidney kidney
23 chr1:212113600-212151600 Weak transcription Psoas Muscle Psoas
24 chr1:212113600-212170200 Weak transcription Fetal Brain Male brain
25 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
26 chr1:212115400-212138800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:212115800-212132200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:212115800-212132400 Weak transcription Brain Substantia Nigra brain
29 chr1:212115800-212132600 Weak transcription Placenta Placenta
30 chr1:212115800-212144000 Weak transcription Adipose Nuclei Adipose
31 chr1:212115800-212151600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:212116800-212125200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:212117000-212139600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:212117800-212132600 Weak transcription Left Ventricle heart
35 chr1:212118400-212139000 Weak transcription Osteobl bone
36 chr1:212118600-212125200 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:212118600-212126000 Weak transcription Primary B cells from cord blood blood
38 chr1:212118600-212132200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:212118600-212132400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:212118600-212132600 Weak transcription Brain Cingulate Gyrus brain
41 chr1:212118600-212141800 Weak transcription HSMM muscle
42 chr1:212118600-212149000 Weak transcription Fetal Heart heart
43 chr1:212119000-212132600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:212119000-212133000 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr1:212119600-212126600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:212121600-212125200 Weak transcription A549 lung
47 chr1:212121600-212132400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:212121800-212125600 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:212121800-212125800 Strong transcription Fetal Thymus thymus
50 chr1:212121800-212126600 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015