The 2.0 version of rSNPBase

Variant report

Variant rs4307612
Chromosome Location chr1:212184217-212184218
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
3 chr1:212123800-212198200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:212133400-212188200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:212133800-212208000 Weak transcription Gastric stomach
7 chr1:212134000-212207600 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:212134000-212207800 Weak transcription Colonic Mucosa Colon
9 chr1:212136600-212204000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:212146000-212185600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:212148800-212207600 Weak transcription Rectal Smooth Muscle rectum
12 chr1:212149200-212199800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:212151800-212187000 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr1:212152800-212201600 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:212153400-212203600 Weak transcription Psoas Muscle Psoas
16 chr1:212153600-212202600 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:212160000-212189400 Weak transcription NHDF-Ad bronchial
18 chr1:212160200-212199800 Weak transcription Brain Substantia Nigra brain
19 chr1:212160200-212202600 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:212161200-212189200 Weak transcription NH-A brain
21 chr1:212168800-212185200 Strong transcription Fetal Thymus thymus
22 chr1:212170000-212184600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:212170200-212191400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:212170200-212197600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:212170400-212185000 Strong transcription Dnd41 blood
26 chr1:212170400-212202600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:212170600-212194200 Weak transcription Placenta Placenta
28 chr1:212170800-212199200 Weak transcription Pancreas Pancrea
29 chr1:212170800-212207800 Weak transcription Right Ventricle heart
30 chr1:212171000-212188200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:212171000-212189400 Weak transcription Brain Anterior Caudate brain
32 chr1:212171000-212199800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:212171200-212189800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:212171200-212197800 Weak transcription Brain Cingulate Gyrus brain
35 chr1:212171200-212208000 Weak transcription Esophagus oesophagus
36 chr1:212171200-212208000 Weak transcription Lung lung
37 chr1:212171400-212197800 Weak transcription Aorta Aorta
38 chr1:212171600-212185400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:212171600-212189400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:212171600-212198000 Weak transcription Fetal Kidney kidney
41 chr1:212171600-212198200 Weak transcription Small Intestine intestine
42 chr1:212171600-212207400 Weak transcription Fetal Stomach stomach
43 chr1:212171800-212188000 Weak transcription Fetal Intestine Small intestine
44 chr1:212171800-212191400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:212171800-212197600 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr1:212171800-212207600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:212172200-212199800 Weak transcription Stomach Mucosa stomach
48 chr1:212173000-212204200 Weak transcription Fetal Heart heart
49 chr1:212173800-212184800 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr1:212174000-212185200 Strong transcription GM12878-XiMat blood

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Last update: Aug 31, 2015