The 2.0 version of rSNPBase

Variant report

Variant rs4027209
Chromosome Location chr2:11024540-11024541
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11018400-11034600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:11022600-11026800 Enhancers Fetal Intestine Large intestine
3 chr2:11022800-11026000 Enhancers Brain Anterior Caudate brain
4 chr2:11023000-11025200 Enhancers Brain Cingulate Gyrus brain
5 chr2:11023000-11025200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
6 chr2:11023000-11025800 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr2:11023000-11025800 Enhancers Fetal Lung lung
8 chr2:11023000-11025800 Enhancers Ovary ovary
9 chr2:11023000-11026200 Enhancers Duodenum Mucosa Duodenum
10 chr2:11023000-11026800 Enhancers Fetal Intestine Small intestine
11 chr2:11023200-11024600 Enhancers Small Intestine intestine
12 chr2:11023200-11025000 Enhancers Fetal Brain Male brain
13 chr2:11023200-11025200 Enhancers H1 Cell Line embryonic stem cell
14 chr2:11023200-11025200 Enhancers Left Ventricle heart
15 chr2:11023200-11025600 Enhancers Brain Germinal Matrix brain
16 chr2:11023200-11025800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:11023200-11025800 Enhancers H9 Cell Line embryonic stem cell
18 chr2:11023200-11025800 Enhancers Brain Angular Gyrus brain
19 chr2:11023200-11025800 Enhancers Brain Substantia Nigra brain
20 chr2:11023200-11025800 Enhancers Fetal Brain Female brain
21 chr2:11023200-11026200 Enhancers Sigmoid Colon Sigmoid Colon
22 chr2:11023200-11028000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:11023400-11024800 Enhancers Primary T cells from cord blood blood
24 chr2:11023400-11025200 Enhancers HUES48 Cell Line embryonic stem cell
25 chr2:11023400-11025200 Enhancers Fetal Stomach stomach
26 chr2:11023400-11025800 Enhancers Brain Inferior Temporal Lobe brain
27 chr2:11023400-11026000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr2:11023600-11024600 Enhancers Right Ventricle heart
29 chr2:11023600-11025200 Enhancers Right Atrium heart
30 chr2:11023600-11025600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr2:11023600-11025600 Enhancers Brain Hippocampus Middle brain
32 chr2:11023600-11025800 Enhancers HUES64 Cell Line embryonic stem cell
33 chr2:11023600-11026200 Enhancers Fetal Thymus thymus
34 chr2:11023600-11026400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr2:11023800-11024600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:11023800-11024800 Enhancers ES-WA7 Cell Line embryonic stem cell
37 chr2:11023800-11025800 Enhancers HUES6 Cell Line embryonic stem cell
38 chr2:11023800-11026200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr2:11024000-11025000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr2:11024000-11025200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:11024000-11025600 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr2:11024200-11024600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
43 chr2:11024200-11024600 Bivalent Enhancer Adipose Nuclei Adipose
44 chr2:11024200-11024600 Flanking Active TSS A549 lung
45 chr2:11024200-11024800 Enhancers Fetal Heart heart
46 chr2:11024200-11025000 Flanking Active TSS Fetal Kidney kidney
47 chr2:11024200-11025200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr2:11024200-11025200 Enhancers Primary hematopoietic stem cells blood
49 chr2:11024200-11025200 Bivalent Enhancer HepG2 liver
50 chr2:11024200-11025400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015