The 2.0 version of rSNPBase

Variant report

Variant rs402785
Chromosome Location chr19:44492236-44492237
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44489000-44493600 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:44489200-44492400 Weak transcription Brain Cingulate Gyrus brain
3 chr19:44489200-44492400 Weak transcription Brain Inferior Temporal Lobe brain
4 chr19:44489200-44492600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr19:44489200-44492600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr19:44489200-44492600 Weak transcription Fetal Muscle Leg muscle
7 chr19:44489200-44492600 Weak transcription Psoas Muscle Psoas
8 chr19:44489200-44493000 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr19:44489200-44493200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr19:44489200-44493200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr19:44489200-44493400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr19:44489200-44493400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr19:44489200-44493400 Weak transcription Brain Angular Gyrus brain
14 chr19:44489200-44493400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr19:44489200-44493600 Weak transcription Colonic Mucosa Colon
16 chr19:44489200-44494600 Weak transcription Gastric stomach
17 chr19:44489200-44494600 Weak transcription NHLF lung
18 chr19:44489200-44496000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:44489200-44496000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr19:44489200-44496000 Weak transcription Small Intestine intestine
21 chr19:44489200-44496600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:44489200-44500400 Weak transcription HUVEC blood vessel
23 chr19:44489200-44506200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:44489200-44506200 Weak transcription Hela-S3 cervix
25 chr19:44489400-44492400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr19:44489400-44492400 Weak transcription Pancreas Pancrea
27 chr19:44489400-44492400 Weak transcription Rectal Smooth Muscle rectum
28 chr19:44489400-44492400 Weak transcription HSMM muscle
29 chr19:44489400-44492600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr19:44489400-44492600 Weak transcription Brain Germinal Matrix brain
31 chr19:44489400-44492600 Weak transcription Duodenum Mucosa Duodenum
32 chr19:44489400-44492600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr19:44489400-44492600 Weak transcription Stomach Smooth Muscle stomach
34 chr19:44489400-44492600 Weak transcription Thymus Thymus
35 chr19:44489400-44492800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr19:44489400-44492800 Weak transcription Brain Substantia Nigra brain
37 chr19:44489400-44492800 Weak transcription Fetal Brain Female brain
38 chr19:44489400-44492800 Weak transcription Fetal Thymus thymus
39 chr19:44489400-44492800 Weak transcription NHDF-Ad bronchial
40 chr19:44489400-44493000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr19:44489400-44493200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr19:44489400-44493200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr19:44489400-44493200 Weak transcription Placenta Placenta
44 chr19:44489400-44493200 Weak transcription NHEK skin
45 chr19:44489400-44493400 Weak transcription Brain Anterior Caudate brain
46 chr19:44489400-44493400 Weak transcription NH-A brain
47 chr19:44489400-44493600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr19:44489400-44493600 Weak transcription Primary B cells from cord blood blood
49 chr19:44489400-44493600 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr19:44489400-44494000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015