Variant report

Variant	rs4028695
Chromosome Location	chr16:48661103-48661104
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:48383760..48385274-chr16:48659908..48662713,2	K562	blood:
2	chr16:48657217..48659411-chr16:48659420..48662381,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000260086	Chromatin interaction

rs_ID	r²[population]
rs12918232	0.80[AMR][1000 genomes]
rs2047601	1.00[CHB][hapmap]
rs2062553	0.85[CEU][hapmap]
rs2062554	0.89[CEU][hapmap]
rs2354580	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs3785138	1.00[CHB][hapmap]
rs3826176	1.00[CHB][hapmap]
rs4315324	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7206781	0.89[CEU][hapmap]
rs8052026	0.85[CEU][hapmap]
rs8063059	0.85[CEU][hapmap]
rs9921402	0.85[CEU][hapmap]
rs9930255	0.85[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:48657800-48664000	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr16:48657800-48664000	Weak transcription	Colon Smooth Muscle	Colon
3	chr16:48658000-48662000	Weak transcription	Fetal Intestine Large	intestine
4	chr16:48658000-48662400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr16:48658000-48662400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr16:48658000-48663800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr16:48658000-48664000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr16:48658000-48664000	Weak transcription	Primary T helper cells PMA-I stimulated	--
9	chr16:48658000-48664000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr16:48658000-48664000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr16:48658000-48664000	Weak transcription	Hela-S3	cervix
12	chr16:48658000-48664000	Weak transcription	NHDF-Ad	bronchial
13	chr16:48658000-48664000	Weak transcription	Osteobl	bone
14	chr16:48658000-48664200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr16:48658000-48667200	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr16:48658000-48670400	Weak transcription	Pancreas	Pancrea
17	chr16:48658400-48662400	Weak transcription	Fetal Intestine Small	intestine
18	chr16:48658600-48663400	Weak transcription	Lung	lung
19	chr16:48658600-48664000	Weak transcription	Placenta	Placenta
20	chr16:48658600-48664000	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chr16:48658800-48663800	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr16:48658800-48663800	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr16:48658800-48664000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr16:48658800-48664000	Weak transcription	Fetal Thymus	thymus
25	chr16:48658800-48664200	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr16:48659000-48661200	Weak transcription	HepG2	liver
27	chr16:48659000-48663600	Weak transcription	Primary neutrophils fromperipheralblood	blood

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