Variant report
| Variant | rs4068897 |
|---|---|
| Chromosome Location | chr3:79109468-79109469 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:12)
| rs_ID | r2[population] |
|---|---|
| rs12495750 | 0.84[ASW][hapmap] |
| rs1350104 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1374883 | 0.84[ASW][hapmap] |
| rs4234349 | 1.00[AMR][1000 genomes] |
| rs4680952 | 1.00[AMR][1000 genomes] |
| rs4680953 | 0.84[ASW][hapmap] |
| rs6793514 | 1.00[AMR][1000 genomes] |
| rs6804846 | 1.00[AMR][1000 genomes] |
| rs7615922 | 1.00[AMR][1000 genomes] |
| rs7625358 | 1.00[AMR][1000 genomes] |
| rs7628994 | 0.84[ASW][hapmap] |
| rs9847749 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv834745 | chr3:79055426-79227937 | Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
