Variant report

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10513145	0.97[ASN][1000 genomes]
rs10805507	0.97[ASN][1000 genomes]
rs10940611	0.97[ASN][1000 genomes]
rs11739498	0.97[ASN][1000 genomes]
rs11745514	0.97[ASN][1000 genomes]
rs11746649	0.88[ASN][1000 genomes]
rs11953112	0.97[ASN][1000 genomes]
rs12522572	0.97[ASN][1000 genomes]
rs13157057	1.00[ASN][1000 genomes]
rs13187020	0.97[ASN][1000 genomes]
rs1396503	0.97[ASN][1000 genomes]
rs17709263	0.97[ASN][1000 genomes]
rs17766068	0.97[ASN][1000 genomes]
rs17766240	0.97[ASN][1000 genomes]
rs27937	1.00[YRI][hapmap]
rs34384235	1.00[ASN][1000 genomes]
rs34415498	0.97[ASN][1000 genomes]
rs35345509	1.00[ASN][1000 genomes]
rs35917227	1.00[ASN][1000 genomes]
rs378828	0.93[YRI][hapmap]
rs3846534	0.86[YRI][hapmap]
rs385193	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs3914030	0.97[ASN][1000 genomes]
rs3932819	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs40169	0.94[YRI][hapmap]
rs413227	0.80[AMR][1000 genomes]
rs4700281	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4700282	0.97[ASN][1000 genomes]
rs4700283	0.97[ASN][1000 genomes]
rs56262220	0.88[ASN][1000 genomes]
rs62368176	0.97[ASN][1000 genomes]
rs62368203	0.97[ASN][1000 genomes]
rs62368206	0.97[ASN][1000 genomes]
rs660263	0.84[AMR][1000 genomes]
rs719427	0.97[ASN][1000 genomes]
rs719428	0.83[AMR][1000 genomes]
rs719429	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4842	chr5:57653257-57694850	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv508358	chr5:57673230-57709684	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1032746	chr5:57675471-57701548	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv989305	chr5:57678008-57695255	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57677200-57689600	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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