Variant report

Variant	rs4110681
Chromosome Location	chrX:91365741-91365742
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17174382	1.00[GIH][hapmap]
rs5984162	1.00[MEX][hapmap]
rs6618861	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432350	chrX:91158935-91590765	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:91360600-91373200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chrX:91362400-91373000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chrX:91363600-91376400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chrX:91364600-91366600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chrX:91364800-91368600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chrX:91365000-91365800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chrX:91365000-91365800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chrX:91365000-91367400	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chrX:91365600-91366000	Active TSS	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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