Variant report

Variant rs41187
Chromosome Location chr16:46728952-46728953
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:46724800-46742000 Weak transcription Right Ventricle heart
2 chr16:46725000-46730000 Weak transcription Left Ventricle heart
3 chr16:46725000-46732600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr16:46725000-46733000 Weak transcription Primary T cells fromperipheralblood blood
5 chr16:46725000-46734400 Weak transcription Spleen Spleen
6 chr16:46725000-46738800 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr16:46725000-46739200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr16:46725000-46744400 Weak transcription Psoas Muscle Psoas
9 chr16:46725200-46729800 Weak transcription Fetal Muscle Trunk muscle
10 chr16:46725200-46730600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr16:46725200-46733000 Weak transcription Brain Cingulate Gyrus brain
12 chr16:46725200-46733400 Strong transcription H9 Cell Line embryonic stem cell
13 chr16:46725200-46738800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr16:46725400-46729400 Weak transcription Fetal Muscle Leg muscle
15 chr16:46725400-46731200 Weak transcription Primary T cells from cord blood blood
16 chr16:46725400-46733200 Weak transcription Fetal Brain Female brain
17 chr16:46725400-46733800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr16:46725400-46739400 Weak transcription Placenta Placenta
19 chr16:46725600-46730000 Weak transcription Fetal Intestine Large intestine
20 chr16:46725600-46734600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr16:46725600-46734600 Strong transcription HUES6 Cell Line embryonic stem cell
22 chr16:46725600-46736000 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr16:46725600-46752200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr16:46725800-46730000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr16:46725800-46730000 Weak transcription Stomach Mucosa stomach
26 chr16:46725800-46730000 Weak transcription Thymus Thymus
27 chr16:46725800-46731400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr16:46725800-46733400 Strong transcription H1 Cell Line embryonic stem cell
29 chr16:46725800-46733400 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr16:46725800-46733600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr16:46725800-46734400 Strong transcription iPS-18 Cell Line embryonic stem cell
32 chr16:46725800-46734400 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr16:46725800-46734400 Weak transcription NHDF-Ad bronchial
34 chr16:46725800-46735800 Weak transcription Fetal Kidney kidney
35 chr16:46725800-46736400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr16:46725800-46737400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr16:46726000-46729000 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr16:46726000-46730800 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr16:46726000-46732600 Weak transcription Fetal Lung lung
40 chr16:46726000-46732800 Strong transcription A549 lung
41 chr16:46726000-46733800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr16:46726000-46735800 Weak transcription Fetal Brain Male brain
43 chr16:46726000-46736000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr16:46726200-46729400 Weak transcription Primary hematopoietic stem cells blood
45 chr16:46726200-46730000 Weak transcription Fetal Stomach stomach
46 chr16:46726200-46730600 Strong transcription Hela-S3 cervix
47 chr16:46726200-46730800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr16:46726200-46732400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr16:46726200-46732600 Weak transcription Brain Germinal Matrix brain
50 chr16:46726200-46733200 Weak transcription Duodenum Mucosa Duodenum

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