Variant report

Variant	rs41267465
Chromosome Location	chr4:15437836-15437837
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:15437132..15438963-chr4:15440613..15442716,2	K562	blood:
2	chr4:15436833..15438688-chr4:15444566..15446300,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2215809	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3448986	chr4:14928802-15805558	Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15431400-15443800	Weak transcription	Aorta	Aorta
2	chr4:15435000-15438000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr4:15435200-15438200	Enhancers	Adipose Nuclei	Adipose
4	chr4:15435600-15438000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr4:15436200-15438600	Enhancers	Stomach Smooth Muscle	stomach
6	chr4:15436400-15438000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:15436400-15439600	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr4:15436400-15440600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr4:15436600-15438000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr4:15436600-15438000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr4:15436600-15440400	Weak transcription	NHDF-Ad	bronchial
12	chr4:15437000-15438200	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr4:15437200-15438000	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr4:15437200-15438200	Enhancers	Brain Angular Gyrus	brain
15	chr4:15437200-15438200	Enhancers	Brain Anterior Caudate	brain
16	chr4:15437200-15438200	Enhancers	Brain Substantia Nigra	brain
17	chr4:15437200-15438400	Enhancers	Brain Germinal Matrix	brain
18	chr4:15437200-15438400	Enhancers	Brain Inferior Temporal Lobe	brain
19	chr4:15437200-15438400	Enhancers	Fetal Brain Male	brain
20	chr4:15437200-15438400	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr4:15437200-15438600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr4:15437200-15438600	Enhancers	Fetal Stomach	stomach
23	chr4:15437200-15438800	Enhancers	Fetal Lung	lung
24	chr4:15437200-15439000	Enhancers	Fetal Brain Female	brain
25	chr4:15437400-15438000	Enhancers	Esophagus	oesophagus
26	chr4:15437400-15438200	Enhancers	Left Ventricle	heart
27	chr4:15437400-15438200	Enhancers	Psoas Muscle	Psoas
28	chr4:15437400-15438400	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr4:15437400-15438400	Enhancers	Primary hematopoietic stem cells short term culture	blood
30	chr4:15437400-15438400	Enhancers	Brain Hippocampus Middle	brain
31	chr4:15437400-15438400	Enhancers	Fetal Muscle Leg	muscle
32	chr4:15437400-15438400	Enhancers	Right Ventricle	heart
33	chr4:15437400-15438600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr4:15437400-15439000	Enhancers	Brain Cingulate Gyrus	brain
35	chr4:15437600-15438000	Enhancers	Primary hematopoietic stem cells	blood
36	chr4:15437600-15438200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr4:15437600-15438200	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr4:15437600-15438400	Enhancers	Colon Smooth Muscle	Colon
39	chr4:15437600-15440600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr4:15437800-15438000	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr4:15437800-15438200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr4:15437800-15438200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr4:15437800-15438200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr4:15437800-15438400	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr4:15437800-15438400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr4:15437800-15438400	Enhancers	Duodenum Smooth Muscle	Duodenum
47	chr4:15437800-15438400	Enhancers	Ovary	ovary
48	chr4:15437800-15438400	Enhancers	HSMM	muscle
49	chr4:15437800-15438400	Enhancers	Osteobl	bone
50	chr4:15437800-15438800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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