Variant report

Variant	rs2215809
Chromosome Location	chr4:15440633-15440634
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:15437132..15438963-chr4:15440613..15442716,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1024760	0.87[CEU][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs41267465	0.82[ASN][1000 genomes]
rs4698382	0.87[CEU][hapmap];0.82[EUR][1000 genomes]
rs719993	0.87[CEU][hapmap]
rs9990934	0.87[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3448986	chr4:14928802-15805558	Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15431400-15443800	Weak transcription	Aorta	Aorta
2	chr4:15438200-15452400	Weak transcription	Left Ventricle	heart
3	chr4:15438200-15452600	Weak transcription	Fetal Kidney	kidney
4	chr4:15438400-15440800	Weak transcription	HSMM	muscle
5	chr4:15438400-15443800	Weak transcription	Fetal Muscle Leg	muscle
6	chr4:15438400-15444000	Weak transcription	Ovary	ovary
7	chr4:15438400-15444400	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr4:15438400-15446200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr4:15438400-15458800	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr4:15438600-15442400	Weak transcription	Fetal Stomach	stomach
11	chr4:15438600-15444000	Weak transcription	Stomach Smooth Muscle	stomach
12	chr4:15438800-15453000	Weak transcription	Fetal Lung	lung
13	chr4:15438800-15471200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr4:15440400-15440800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr4:15440400-15441000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr4:15440400-15441000	Enhancers	NHDF-Ad	bronchial
17	chr4:15440400-15441000	Enhancers	NHLF	lung
18	chr4:15440400-15441200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr4:15440400-15441400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr4:15440600-15440800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr4:15440600-15441000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr4:15440600-15441000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr4:15440600-15441000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr4:15440600-15441000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr4:15440600-15441200	Enhancers	Osteobl	bone

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