Variant report

Variant	rs41273650
Chromosome Location	chr6:44494459-44494460
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1575364	0.86[EUR][1000 genomes]
rs16872008	0.82[EUR][1000 genomes]
rs4432970	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4437456	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs752287	0.84[EUR][1000 genomes]
rs752288	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv969300	chr6:44493755-44494845	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44492400-44496600	Enhancers	Fetal Thymus	thymus
2	chr6:44492400-44509800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr6:44493000-44494600	Weak transcription	Thymus	Thymus
4	chr6:44493200-44498000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:44493400-44494800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr6:44493600-44495600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:44494400-44495800	Enhancers	Dnd41	blood
8	chr6:44494400-44495800	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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