Variant report

Variant	rs41291124
Chromosome Location	chr10:95849097-95849098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs57149229	1.00[EUR][1000 genomes]
rs7071168	1.00[EUR][1000 genomes]
rs7076847	1.00[EUR][1000 genomes]
rs7089545	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7089906	1.00[EUR][1000 genomes]
rs7909098	1.00[EUR][1000 genomes]

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95825800-95850400	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr10:95831400-95864200	Weak transcription	Colonic Mucosa	Colon
3	chr10:95836600-95861400	Weak transcription	Pancreas	Pancrea
4	chr10:95836600-95863400	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr10:95837600-95876000	Weak transcription	Fetal Intestine Large	intestine
6	chr10:95843400-95849600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr10:95843400-95864000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr10:95845400-95852600	Weak transcription	HSMMtube	muscle
9	chr10:95845400-95860600	Weak transcription	Spleen	Spleen
10	chr10:95845400-95867800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr10:95845600-95853400	Weak transcription	Lung	lung
12	chr10:95846200-95850000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr10:95846400-95851600	Weak transcription	Brain Germinal Matrix	brain
14	chr10:95847600-95849200	Enhancers	Stomach Mucosa	stomach
15	chr10:95847800-95860600	Weak transcription	Fetal Intestine Small	intestine
16	chr10:95848000-95849200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr10:95848000-95849600	Enhancers	NHLF	lung
18	chr10:95848200-95849200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr10:95848200-95849200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr10:95848200-95849200	Enhancers	Adipose Nuclei	Adipose
21	chr10:95848200-95849200	Enhancers	Fetal Muscle Leg	muscle
22	chr10:95848400-95849200	Flanking Active TSS	A549	lung
23	chr10:95848400-95849600	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr10:95848600-95849200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr10:95848600-95849200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr10:95848600-95849200	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
27	chr10:95848600-95849200	Enhancers	Fetal Brain Female	brain
28	chr10:95848600-95849200	Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr10:95848600-95849400	Flanking Active TSS	Fetal Lung	lung
30	chr10:95848600-95851200	Active TSS	Aorta	Aorta
31	chr10:95848600-95851400	Active TSS	Stomach Smooth Muscle	stomach
32	chr10:95848800-95849200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr10:95848800-95849200	Enhancers	Brain Cingulate Gyrus	brain
34	chr10:95848800-95849200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr10:95848800-95849200	Flanking Active TSS	Colon Smooth Muscle	Colon
36	chr10:95848800-95849200	Enhancers	Fetal Muscle Trunk	muscle
37	chr10:95848800-95849200	Flanking Active TSS	Fetal Stomach	stomach
38	chr10:95848800-95849200	Active TSS	Left Ventricle	heart
39	chr10:95848800-95849200	Flanking Active TSS	Ovary	ovary
40	chr10:95848800-95849200	Flanking Active TSS	Rectal Smooth Muscle	rectum
41	chr10:95848800-95849200	Flanking Active TSS	Right Atrium	heart
42	chr10:95848800-95849200	Enhancers	Right Ventricle	heart
43	chr10:95849000-95849200	Active TSS	Fetal Brain Male	brain
44	chr10:95849000-95849200	Enhancers	Psoas Muscle	Psoas
45	chr10:95849000-95849200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr10:95849000-95849200	Enhancers	Osteobl	bone
47	chr10:95849000-95849600	Active TSS	Brain Anterior Caudate	brain
48	chr10:95849000-95852400	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr10:95849000-95862200	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr10:95849000-95862400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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