The 2.0 version of rSNPBase

Variant report

Variant rs41301184
Chromosome Location chr1:84700604-84700605
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84657600-84708000 Weak transcription Left Ventricle heart
2 chr1:84659000-84700800 Weak transcription Colon Smooth Muscle Colon
3 chr1:84659800-84701400 Weak transcription NHLF lung
4 chr1:84665200-84700800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:84665400-84701000 Weak transcription Fetal Kidney kidney
6 chr1:84666800-84710200 Weak transcription HSMMtube muscle
7 chr1:84672600-84701000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:84672600-84711200 Weak transcription Brain Substantia Nigra brain
9 chr1:84675200-84712800 Weak transcription NH-A brain
10 chr1:84675800-84705000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:84683600-84701000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:84683600-84701000 Weak transcription Ovary ovary
13 chr1:84684000-84701000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:84684600-84700800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:84685400-84705400 Weak transcription HUVEC blood vessel
16 chr1:84685400-84705600 Weak transcription Brain Germinal Matrix brain
17 chr1:84685600-84700800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:84685600-84700800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:84685600-84713400 Weak transcription Rectal Smooth Muscle rectum
20 chr1:84686200-84701000 Weak transcription Brain Cingulate Gyrus brain
21 chr1:84688600-84700800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:84688800-84700800 Weak transcription Fetal Lung lung
23 chr1:84688800-84701000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:84689000-84701000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:84689200-84701000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:84689400-84700800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:84689600-84701000 Weak transcription Fetal Muscle Leg muscle
28 chr1:84690000-84700800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:84690000-84700800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:84690000-84719400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:84690200-84707400 Weak transcription Right Ventricle heart
32 chr1:84690400-84700800 Weak transcription Fetal Intestine Large intestine
33 chr1:84690400-84702600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:84690400-84705000 Weak transcription Aorta Aorta
35 chr1:84690400-84711800 Weak transcription Spleen Spleen
36 chr1:84690600-84700800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:84690600-84701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:84690600-84701200 Weak transcription Esophagus oesophagus
39 chr1:84690800-84701000 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:84691200-84712200 Weak transcription Pancreas Pancrea
41 chr1:84691400-84701000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:84691400-84705000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:84691400-84707000 Weak transcription Fetal Stomach stomach
44 chr1:84691600-84700800 Weak transcription Brain Angular Gyrus brain
45 chr1:84691600-84705000 Weak transcription Fetal Muscle Trunk muscle
46 chr1:84693200-84701000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:84694200-84701200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:84694600-84700800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr1:84694600-84700800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:84697400-84705000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015