The 2.0 version of rSNPBase

Variant report

Variant rs41310978
Chromosome Location chr15:83561606-83561607
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:83520000-83563800 Weak transcription Brain Hippocampus Middle brain
2 chr15:83524600-83567800 Weak transcription Left Ventricle heart
3 chr15:83524800-83563800 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr15:83540600-83573200 Weak transcription Right Atrium heart
5 chr15:83540800-83563600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr15:83541000-83566200 Weak transcription Spleen Spleen
7 chr15:83542400-83564000 Weak transcription Lung lung
8 chr15:83542400-83567200 Weak transcription Brain Angular Gyrus brain
9 chr15:83543600-83567600 Weak transcription Aorta Aorta
10 chr15:83544000-83563800 Weak transcription Brain Anterior Caudate brain
11 chr15:83554400-83564000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr15:83556000-83563800 Weak transcription Brain Cingulate Gyrus brain
13 chr15:83556800-83563800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr15:83557400-83563800 Weak transcription Brain Substantia Nigra brain
15 chr15:83558000-83563800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr15:83558200-83563800 Weak transcription H1 Cell Line embryonic stem cell
17 chr15:83558200-83563800 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr15:83558200-83563800 Weak transcription Stomach Smooth Muscle stomach
19 chr15:83558200-83564000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr15:83558200-83565000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr15:83558400-83563600 Weak transcription HSMM muscle
22 chr15:83558400-83569600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr15:83558600-83563600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:83558600-83566600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr15:83558600-83567800 Weak transcription Psoas Muscle Psoas
26 chr15:83558800-83562000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr15:83559200-83563800 Weak transcription Fetal Stomach stomach
28 chr15:83559600-83563800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr15:83559600-83570200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr15:83560000-83563600 Weak transcription Rectal Smooth Muscle rectum
31 chr15:83560000-83563800 Weak transcription Colon Smooth Muscle Colon
32 chr15:83560200-83563800 Weak transcription Fetal Muscle Leg muscle
33 chr15:83560400-83563800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr15:83560400-83564200 Weak transcription HSMMtube muscle
35 chr15:83560400-83570200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr15:83560600-83563800 Weak transcription Pancreas Pancrea
37 chr15:83560600-83563800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr15:83560600-83565200 Weak transcription Gastric stomach
39 chr15:83561200-83561800 Enhancers Brain Germinal Matrix brain
40 chr15:83561200-83561800 Bivalent Enhancer K562 blood
41 chr15:83561400-83566200 Weak transcription Liver Liver
42 chr15:83561600-83562000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015