Variant report

Variant	rs41393146
Chromosome Location	chr18:44112580-44112581
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12956234	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17768374	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34175594	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34693070	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4890667	0.86[YRI][hapmap]
rs9945193	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9946967	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9947183	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9949102	0.89[ASW][hapmap];0.82[CEU][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9949302	0.84[CEU][hapmap];0.83[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9956148	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9964481	0.91[YRI][hapmap]
rs9967253	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44086000-44114400	Weak transcription	Spleen	Spleen
2	chr18:44093200-44118600	Strong transcription	Primary monocytes fromperipheralblood	blood
3	chr18:44093200-44120400	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr18:44094000-44126000	Weak transcription	Adipose Nuclei	Adipose
5	chr18:44104600-44112800	Weak transcription	Lung	lung
6	chr18:44108600-44119400	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr18:44109200-44126200	Weak transcription	Right Ventricle	heart
8	chr18:44111200-44126000	Weak transcription	Brain Angular Gyrus	brain
9	chr18:44112400-44117600	Weak transcription	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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