Variant report

Variant	rs4143452
Chromosome Location	chr7:17410930-17410931
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr7:17410846-17412352	SK-N-SH	brain:	n/a	chr7:17411451-17411462 chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
2	TCF12	chr7:17410748-17412422	SK-N-SH	brain:	n/a	n/a
3	EP300	chr7:17410785-17412452	SK-N-SH	brain:	n/a	chr7:17410834-17410848 chr7:17411452-17411461 chr7:17411453-17411462
4	GATA3	chr7:17410757-17412409	SK-N-SH	brain:	n/a	chr7:17411454-17411463 chr7:17411227-17411235
5	MAX	chr7:17410908-17412295	Hela-S3	cervix:	n/a	chr7:17411453-17411462
6	TCF12	chr7:17410592-17412286	A549	lung:	n/a	n/a
7	GTF2F1	chr7:17410790-17412169	Hela-S3	cervix:	n/a	n/a
8	RCOR1	chr7:17410608-17412293	Hela-S3	cervix:	n/a	n/a
9	CEBPB	chr7:17410906-17412308	Hela-S3	cervix:	n/a	chr7:17411355-17411368
10	EP300	chr7:17410902-17412384	A549	lung:	n/a	chr7:17411452-17411461 chr7:17411453-17411462
11	GATA2	chr7:17410874-17412259	HUVEC	blood vessel:	n/a	chr7:17411454-17411463 chr7:17411227-17411235
12	GATA3	chr7:17410695-17412486	SK-N-SH	brain:	n/a	chr7:17411454-17411463 chr7:17411227-17411235
13	FOSL2	chr7:17410753-17412362	A549	lung:	n/a	chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
14	ZKSCAN1	chr7:17410820-17411646	Hela-S3	cervix:	n/a	n/a
15	E2F4	chr7:17410774-17411021	MCF10A-Er-Src	breast:	n/a	n/a
16	GATA3	chr7:17410543-17412488	A549	lung:	n/a	chr7:17411454-17411463 chr7:17411227-17411235
17	SMC3	chr7:17410846-17412460	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr7:17410903-17412330	Hela-S3	cervix:	n/a	n/a
19	MXI1	chr7:17410892-17412274	Hela-S3	cervix:	n/a	n/a
20	SP1	chr7:17410720-17412348	A549	lung:	n/a	n/a
21	MAX	chr7:17410813-17412435	A549	lung:	n/a	chr7:17411453-17411462
22	TEAD4	chr7:17410887-17412352	SK-N-SH	brain:	n/a	n/a
23	FOSL2	chr7:17410469-17412323	SK-N-SH	brain:	n/a	chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
24	JUND	chr7:17410778-17412586	SK-N-SH	brain:	n/a	chr7:17411451-17411462 chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
25	PBX3	chr7:17410703-17412315	SK-N-SH	brain:	n/a	n/a
26	TCF12	chr7:17410380-17412386	SK-N-SH	brain:	n/a	n/a
27	POLR2A	chr7:17408268-17412500	MCF10A-Er-Src	breast:	n/a	n/a
28	PBX3	chr7:17410468-17412425	SK-N-SH	brain:	n/a	n/a
29	RAD21	chr7:17410867-17412314	Hela-S3	cervix:	n/a	n/a
30	RFX5	chr7:17410768-17412306	Hela-S3	cervix:	n/a	chr7:17411683-17411692
31	TBP	chr7:17410792-17412320	Hela-S3	cervix:	n/a	n/a
32	JUND	chr7:17410715-17412393	Hela-S3	cervix:	n/a	chr7:17411451-17411462 chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
33	POLR2A	chr7:17410578-17412551	IMR90	lung:	n/a	n/a
34	MAX	chr7:17410929-17411443	Hela-S3	cervix:	n/a	n/a
35	NFIC	chr7:17410769-17411661	SK-N-SH	brain:	n/a	n/a
36	STAT3	chr7:17410823-17412330	Hela-S3	cervix:	n/a	chr7:17411452-17411461 chr7:17411453-17411462 chr7:17410993-17411001
37	POLR2A	chr7:17410758-17412275	HUVEC	blood vessel:	n/a	n/a
38	JUN	chr7:17410877-17412414	Hela-S3	cervix:	n/a	chr7:17411452-17411461 chr7:17411453-17411461 chr7:17411453-17411460 chr7:17411451-17411463 chr7:17411456-17411463 chr7:17412278-17412290
39	SMARCC1	chr7:17410921-17412434	Hela-S3	cervix:	n/a	n/a
40	NFIC	chr7:17410576-17412503	SK-N-SH	brain:	n/a	n/a

Variant related genes	Relation type
ENSG00000236318	TF binding region

Extended variants
information (count: 109 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10233705	0.96[ASN][1000 genomes]
rs10253101	0.86[AMR][1000 genomes]
rs10269143	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10272066	0.94[CEU][hapmap];0.90[CHB][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10274243	0.88[ASN][1000 genomes]
rs10276661	0.92[ASN][1000 genomes]
rs10277122	0.88[AMR][1000 genomes]
rs1111544	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12667669	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17137566	0.84[CHB][hapmap];0.90[YRI][hapmap]
rs1993247	0.88[ASN][1000 genomes]
rs2034685	0.94[ASN][1000 genomes]
rs2040623	0.94[CEU][hapmap];0.85[CHB][hapmap];0.90[YRI][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2053998	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2066853	0.85[CHB][hapmap];0.80[JPT][hapmap];0.82[ASN][1000 genomes]
rs2078982	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2123744	0.92[ASN][1000 genomes]
rs2198497	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2237297	0.84[CHB][hapmap];0.90[YRI][hapmap]
rs28393181	0.85[AMR][1000 genomes]
rs3757824	0.82[CEU][hapmap];0.88[AMR][1000 genomes]
rs3802082	0.85[CHB][hapmap];0.91[YRI][hapmap]
rs55675811	0.84[AMR][1000 genomes]
rs57615658	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60223362	0.80[AMR][1000 genomes]
rs6967800	0.90[ASN][1000 genomes]
rs73079677	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73081762	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73081765	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73081770	0.92[ASN][1000 genomes]
rs7780687	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7791070	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9638741	0.92[ASN][1000 genomes]
rs9638742	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9639287	0.94[ASN][1000 genomes]
rs9639288	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9655142	1.00[CHB][hapmap];0.90[JPT][hapmap];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9655145	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:71 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv887761	chr7:16834361-17732490	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv887762	chr7:16834361-17746628	Enhancers Genic enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv887763	chr7:16834361-17750811	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
4	nsv887765	chr7:16839835-17750811	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
5	nsv1015831	chr7:16854300-17732227	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv538750	chr7:16854300-17732227	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
7	nsv529874	chr7:16877677-17703617	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
8	nsv532093	chr7:16877677-17712291	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
9	nsv1024829	chr7:16900137-17645026	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
10	nsv1023794	chr7:16913789-17416093	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
11	nsv464398	chr7:16915528-17414784	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
12	nsv606342	chr7:16915528-17414784	Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
13	nsv1024472	chr7:16933440-17412361	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
14	nsv887774	chr7:16946486-17644213	Enhancers Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
15	nsv887775	chr7:16947921-17663745	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
16	nsv949237	chr7:16959444-17635119	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
17	nsv1034924	chr7:16964658-17415044	Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
18	nsv538751	chr7:16964658-17415044	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
19	nsv1023604	chr7:16964718-17732630	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
20	nsv538752	chr7:16964718-17732630	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
21	esv2758106	chr7:17010053-17531479	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
22	esv2759515	chr7:17010053-17531479	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
23	nsv1018747	chr7:17074137-17732771	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
24	nsv538753	chr7:17074137-17732771	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
25	nsv532094	chr7:17074337-17584295	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
26	nsv464399	chr7:17085939-17755584	Active TSS Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
27	nsv606343	chr7:17085939-17755584	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
28	nsv887777	chr7:17089943-17624028	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
29	nsv887778	chr7:17096005-17663745	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
30	nsv8064	chr7:17112945-17444043	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
31	esv2757217	chr7:17129802-17445333	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
32	esv34717	chr7:17131935-17430760	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
33	nsv887780	chr7:17171738-17686090	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
34	nsv887781	chr7:17173879-17679980	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
35	nsv887782	chr7:17173879-17681020	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
36	nsv887783	chr7:17173879-17686090	Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
37	nsv887784	chr7:17177289-17686090	Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
38	nsv887785	chr7:17186113-17663745	Genic enhancers Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
39	nsv532095	chr7:17222770-17651701	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
40	nsv887790	chr7:17228122-17746628	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
41	nsv887791	chr7:17228122-17750811	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
42	nsv869352	chr7:17237983-17932878	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
43	esv2422294	chr7:17240955-17491843	Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
44	nsv1021524	chr7:17251148-17963307	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
45	nsv1021289	chr7:17254117-17873816	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
46	nsv538754	chr7:17254117-17873816	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
47	nsv534309	chr7:17254118-17932878	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
48	nsv533938	chr7:17254118-18040301	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
49	nsv887793	chr7:17380662-17471626	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
50	nsv1026291	chr7:17386462-17601985	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:17380000-17411000	Weak transcription	Aorta	Aorta
2	chr7:17407000-17411600	Enhancers	Muscle Satellite Cultured Cells	--
3	chr7:17407200-17411600	Enhancers	NHDF-Ad	bronchial
4	chr7:17407200-17412200	Enhancers	HSMMtube	muscle
5	chr7:17407200-17412400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr7:17407400-17412200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr7:17407400-17412200	Enhancers	Ovary	ovary
8	chr7:17407400-17412400	Enhancers	NHLF	lung
9	chr7:17407600-17412000	Enhancers	Lung	lung
10	chr7:17407800-17411000	Weak transcription	Left Ventricle	heart
11	chr7:17407800-17412000	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr7:17407800-17412200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr7:17408200-17412600	Enhancers	NHEK	skin
14	chr7:17408400-17412600	Enhancers	HMEC	breast
15	chr7:17408400-17413200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr7:17408600-17411000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr7:17408600-17412000	Enhancers	Stomach Mucosa	stomach
18	chr7:17408600-17412200	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr7:17408600-17412200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr7:17408600-17412400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr7:17408600-17412600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr7:17408600-17412600	Enhancers	HSMM	muscle
23	chr7:17408800-17412000	Enhancers	Placenta	Placenta
24	chr7:17408800-17412200	Enhancers	Fetal Stomach	stomach
25	chr7:17408800-17412400	Enhancers	Duodenum Smooth Muscle	Duodenum
26	chr7:17409000-17412600	Enhancers	Duodenum Mucosa	Duodenum
27	chr7:17409200-17411800	Weak transcription	Stomach Smooth Muscle	stomach
28	chr7:17409200-17412000	Enhancers	Small Intestine	intestine
29	chr7:17409400-17412200	Enhancers	Adipose Nuclei	Adipose
30	chr7:17409600-17411000	Enhancers	Primary hematopoietic stem cells short term culture	blood
31	chr7:17409800-17411200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr7:17409800-17411600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr7:17409800-17412200	Enhancers	Sigmoid Colon	Sigmoid Colon
34	chr7:17409800-17412600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr7:17410000-17412000	Enhancers	Colon Smooth Muscle	Colon
36	chr7:17410000-17412600	Enhancers	HUVEC	blood vessel
37	chr7:17410200-17411000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr7:17410200-17411000	Weak transcription	Pancreas	Pancrea
39	chr7:17410200-17411000	Enhancers	A549	lung
40	chr7:17410200-17411600	Enhancers	Osteobl	bone
41	chr7:17410200-17411800	Weak transcription	Esophagus	oesophagus
42	chr7:17410400-17411000	Weak transcription	Right Atrium	heart
43	chr7:17410400-17411600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr7:17410400-17411800	Weak transcription	Fetal Intestine Large	intestine
45	chr7:17410400-17411800	Weak transcription	Fetal Intestine Small	intestine
46	chr7:17410400-17411800	Enhancers	Hela-S3	cervix
47	chr7:17410400-17412200	Enhancers	Fetal Lung	lung
48	chr7:17410600-17412200	Enhancers	Monocytes-CD14+_RO01746	blood
49	chr7:17410800-17411200	Flanking Active TSS	NH-A	brain
50	chr7:17410800-17412200	Enhancers	Rectal Smooth Muscle	rectum

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