Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:60917588..60920198-chr3:60923789..60925680,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs17063911	1.00[CEU][hapmap]
rs17063914	1.00[CEU][hapmap]
rs17063916	1.00[CEU][hapmap]
rs17063917	1.00[CEU][hapmap]
rs17063920	1.00[CEU][hapmap]
rs17063921	1.00[CEU][hapmap]
rs17063923	1.00[CEU][hapmap]
rs17064187	1.00[CEU][hapmap]
rs17064252	1.00[MEX][hapmap]
rs17064253	1.00[MEX][hapmap]
rs17064395	1.00[CEU][hapmap]
rs17064396	1.00[CEU][hapmap]
rs17686079	1.00[MEX][hapmap]
rs17686275	1.00[MEX][hapmap]
rs17686365	1.00[MEX][hapmap]
rs2594125	1.00[MEX][hapmap]
rs41347345	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs4414847	1.00[CEU][hapmap]
rs60694550	1.00[EUR][1000 genomes]
rs6777567	1.00[MEX][hapmap]
rs73836064	1.00[EUR][1000 genomes]
rs73836066	1.00[EUR][1000 genomes]
rs73836076	1.00[EUR][1000 genomes]
rs73836079	1.00[EUR][1000 genomes]
rs73836192	1.00[EUR][1000 genomes]
rs9820462	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9826449	1.00[EUR][1000 genomes]
rs9851737	1.00[MEX][hapmap]
rs9864812	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534038	chr3:60781917-60993082	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2757872	chr3:60781943-61019003	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2759152	chr3:60781943-61220809	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60917400-60919400	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr3:60917800-60919400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr3:60917800-60919800	Enhancers	HMEC	breast
4	chr3:60918600-60920600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr3:60918600-60921000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr3:60919000-60920400	Weak transcription	NHEK	skin

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