Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs17063911	1.00[CEU][hapmap]
rs17063914	1.00[CEU][hapmap]
rs17063916	1.00[CEU][hapmap]
rs17063917	1.00[CEU][hapmap]
rs17063920	1.00[CEU][hapmap]
rs17063921	1.00[CEU][hapmap]
rs17063923	1.00[CEU][hapmap]
rs17064395	1.00[CEU][hapmap]
rs17064396	1.00[CEU][hapmap]
rs41347345	1.00[CEU][hapmap]
rs41467656	1.00[CEU][hapmap]
rs4414847	1.00[CEU][hapmap]
rs4474995	1.00[EUR][1000 genomes]
rs72889176	1.00[EUR][1000 genomes]
rs72889184	1.00[EUR][1000 genomes]
rs72889190	1.00[EUR][1000 genomes]
rs73838610	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9820462	1.00[CEU][hapmap]
rs9832941	1.00[EUR][1000 genomes]
rs9845331	1.00[GIH][hapmap]
rs9851572	1.00[TSI][hapmap]
rs9851737	1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534038	chr3:60781917-60993082	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2757872	chr3:60781943-61019003	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2759152	chr3:60781943-61220809	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60885800-60902200	Weak transcription	Ovary	ovary

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