Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10801800	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10922810	0.82[EUR][1000 genomes]
rs10922815	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10922818	0.81[ASN][1000 genomes]
rs10922819	0.81[ASN][1000 genomes]
rs10922820	0.89[EUR][1000 genomes]
rs12021593	0.82[ASN][1000 genomes]
rs12058249	0.81[ASN][1000 genomes]
rs12060187	0.81[ASN][1000 genomes]
rs3923534	0.82[ASN][1000 genomes]
rs4233435	0.82[ASN][1000 genomes]
rs4417049	0.82[ASN][1000 genomes]
rs4440840	0.88[CHB][hapmap];0.95[JPT][hapmap]
rs4507991	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4520404	0.91[EUR][1000 genomes]
rs4535988	0.88[CHB][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs6428583	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6689390	0.81[ASN][1000 genomes]
rs6689724	0.81[ASN][1000 genomes]
rs7548218	0.80[ASN][1000 genomes]
rs7553296	0.82[EUR][1000 genomes]
rs9651073	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546803	chr1:90679734-90777717	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90706600-90707600	Weak transcription	Sigmoid Colon	Sigmoid Colon

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