Variant report

Variant	rs4235430
Chromosome Location	chr4:99668311-99668312
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:99667440..99670653-chr4:99714761..99718485,3	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10007831	0.84[AFR][1000 genomes]
rs10009294	0.85[YRI][hapmap]
rs11097632	0.84[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs4377598	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6532762	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9998528	0.82[AFR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99667800-99668400	Enhancers	Dnd41	blood
2	chr4:99667800-99668800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr4:99667800-99669000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:99667800-99669000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr4:99667800-99669000	Enhancers	Sigmoid Colon	Sigmoid Colon
6	chr4:99667800-99669000	Enhancers	HUVEC	blood vessel
7	chr4:99667800-99669200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr4:99667800-99669400	Enhancers	Fetal Muscle Leg	muscle
9	chr4:99667800-99669600	Enhancers	Rectal Mucosa Donor 29	rectum
10	chr4:99667800-99669800	Enhancers	HSMM	muscle
11	chr4:99667800-99670000	Enhancers	Rectal Mucosa Donor 31	rectum
12	chr4:99667800-99670200	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr4:99668000-99668800	Enhancers	Colonic Mucosa	Colon
14	chr4:99668000-99669200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr4:99668000-99669200	Enhancers	Stomach Mucosa	stomach
16	chr4:99668000-99669200	Enhancers	Osteobl	bone
17	chr4:99668000-99669400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr4:99668000-99669600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr4:99668000-99669800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr4:99668000-99670400	Enhancers	Muscle Satellite Cultured Cells	--
21	chr4:99668200-99669200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr4:99668200-99669200	Enhancers	Duodenum Mucosa	Duodenum
23	chr4:99668200-99669200	Enhancers	Fetal Intestine Small	intestine
24	chr4:99668200-99669400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr4:99668200-99670200	Weak transcription	HSMMtube	muscle

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