Variant report

Variant	rs4242264
Chromosome Location	chr5:36415424-36415425
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:36414724..36415549-chr5:36692877..36693835,6	MCF-7	breast:
2	chr5:36414744..36416337-chr5:36692750..36693943,6	MCF-7	breast:
3	chr5:36414583..36415587-chr5:36506983..36508090,7	K562	blood:
4	chr5:36073820..36074324-chr5:36414533..36415465,2	MCF-7	breast:
5	chr5:36414601..36415558-chr5:36689948..36691438,6	MCF-7	breast:
6	chr5:36415024..36418425-chr5:36419163..36425113,5	K562	blood:
7	chr5:36414523..36415507-chr5:36690444..36691337,4	MCF-7	breast:
8	chr5:36414161..36415558-chr5:36507119..36508035,4	MCF-7	breast:
9	chr5:36414939..36416072-chr5:36695630..36696739,5	MCF-7	breast:

No data

rs_ID	r²[population]
rs4580803	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6451287	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6871282	0.88[ASN][1000 genomes]
rs6871434	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36414600-36415600	Enhancers	Colon Smooth Muscle	Colon
2	chr5:36415200-36415600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
3	chr5:36415200-36415600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr5:36415200-36415600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:36415200-36415600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr5:36415200-36415600	Enhancers	Brain Anterior Caudate	brain
7	chr5:36415200-36415600	Enhancers	Brain Substantia Nigra	brain
8	chr5:36415200-36415600	Enhancers	Fetal Intestine Large	intestine
9	chr5:36415200-36415600	Enhancers	Fetal Kidney	kidney
10	chr5:36415200-36415600	Enhancers	Fetal Muscle Leg	muscle
11	chr5:36415200-36415600	Enhancers	Rectal Smooth Muscle	rectum
12	chr5:36415200-36415600	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr5:36415200-36415600	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr5:36415200-36415600	Enhancers	HMEC	breast
15	chr5:36415200-36415600	Enhancers	NHDF-Ad	bronchial
16	chr5:36415200-36415600	Enhancers	NHEK	skin
17	chr5:36415200-36415800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr5:36415200-36415800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr5:36415200-36415800	Enhancers	HSMM	muscle
20	chr5:36415200-36415800	Enhancers	HSMMtube	muscle
21	chr5:36415200-36415800	Enhancers	Osteobl	bone
22	chr5:36415200-36416600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr5:36415200-36416600	Enhancers	Fetal Heart	heart
24	chr5:36415200-36417600	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr5:36415200-36417800	Enhancers	Hela-S3	cervix
26	chr5:36415200-36419200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr5:36415400-36415600	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
28	chr5:36415400-36415600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
29	chr5:36415400-36417400	Weak transcription	NH-A	brain
30	chr5:36415400-36418000	Weak transcription	Liver	Liver

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