The 2.0 version of rSNPBase

Variant report

Variant rs4244317
Chromosome Location chr10:97299769-97299770
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97280800-97301400 Enhancers Fetal Heart heart
2 chr10:97282200-97304400 Weak transcription Brain Germinal Matrix brain
3 chr10:97289200-97309000 Enhancers Left Ventricle heart
4 chr10:97289400-97303800 Weak transcription HSMM muscle
5 chr10:97290000-97301400 Enhancers Rectal Smooth Muscle rectum
6 chr10:97290600-97301800 Weak transcription Ovary ovary
7 chr10:97291200-97301000 Weak transcription Fetal Brain Female brain
8 chr10:97291800-97308600 Enhancers Colon Smooth Muscle Colon
9 chr10:97292600-97299800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr10:97292600-97299800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr10:97292600-97300600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr10:97293000-97299800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr10:97293000-97300400 Weak transcription H9 Cell Line embryonic stem cell
14 chr10:97293200-97302800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr10:97293400-97305400 Enhancers Right Atrium heart
16 chr10:97293400-97306000 Enhancers Fetal Intestine Large intestine
17 chr10:97293600-97299800 Weak transcription Fetal Muscle Trunk muscle
18 chr10:97293600-97302000 Weak transcription Adipose Nuclei Adipose
19 chr10:97295000-97305200 Enhancers Stomach Mucosa stomach
20 chr10:97296000-97299800 Weak transcription Small Intestine intestine
21 chr10:97296200-97301400 Weak transcription Colonic Mucosa Colon
22 chr10:97296200-97306400 Enhancers Liver Liver
23 chr10:97296400-97302400 Enhancers Skeletal Muscle Female skeletal muscle
24 chr10:97296400-97311400 Enhancers Skeletal Muscle Male skeletal muscle
25 chr10:97296600-97302800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr10:97296800-97312600 Weak transcription Placenta Placenta
27 chr10:97297000-97302600 Weak transcription HSMMtube muscle
28 chr10:97297200-97299800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr10:97297200-97300400 Weak transcription Spleen Spleen
30 chr10:97297200-97301400 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr10:97297200-97302800 Weak transcription Fetal Brain Male brain
32 chr10:97297600-97300200 Genic enhancers Aorta Aorta
33 chr10:97298200-97299800 Weak transcription Psoas Muscle Psoas
34 chr10:97298200-97301400 Weak transcription Esophagus oesophagus
35 chr10:97298200-97302000 Enhancers HUES6 Cell Line embryonic stem cell
36 chr10:97298200-97305000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr10:97298200-97308200 Enhancers Fetal Muscle Leg muscle
38 chr10:97298400-97300600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr10:97298400-97300600 Weak transcription Gastric stomach
40 chr10:97298400-97300600 Weak transcription Lung lung
41 chr10:97298400-97300800 Enhancers Fetal Intestine Small intestine
42 chr10:97298400-97305200 Enhancers Duodenum Smooth Muscle Duodenum
43 chr10:97298600-97300400 Enhancers Rectal Mucosa Donor 31 rectum
44 chr10:97298600-97305000 Enhancers Brain Anterior Caudate brain
45 chr10:97298800-97300800 Enhancers Duodenum Mucosa Duodenum
46 chr10:97298800-97301400 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr10:97298800-97305800 Enhancers Brain Hippocampus Middle brain
48 chr10:97299000-97303800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr10:97299000-97307200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
50 chr10:97299200-97300000 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015