Variant report

Variant	rs4304660
Chromosome Location	chr10:22295747-22295748
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2666754	0.87[YRI][hapmap]
rs2666757	1.00[YRI][hapmap]
rs2666772	0.82[YRI][hapmap]
rs2807968	1.00[YRI][hapmap]
rs2807984	0.87[YRI][hapmap]
rs2807985	1.00[YRI][hapmap]
rs2859622	0.87[YRI][hapmap]
rs2998360	0.88[YRI][hapmap]
rs4146689	1.00[YRI][hapmap]
rs4328127	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4364959	0.87[YRI][hapmap]
rs4748776	1.00[YRI][hapmap]
rs4748779	1.00[YRI][hapmap]
rs7069830	0.82[CHB][hapmap]
rs7089656	0.87[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048924	chr10:22177164-22296409	Enhancers Bivalent/Poised TSS Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4304660	MLLT10	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22293400-22304000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:22293600-22299600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:22294600-22303600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr10:22295400-22296400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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