Variant report

Variant	rs7069830
Chromosome Location	chr10:22294687-22294688
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000168283	Chromatin interaction
ENSG00000269897	Chromatin interaction
ENSG00000148444	Chromatin interaction
ENSG00000136770	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs4304660	0.82[CHB][hapmap]
rs7898685	0.95[CEU][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048924	chr10:22177164-22296409	Enhancers Bivalent/Poised TSS Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7069830	MLLT10	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22293200-22295000	Enhancers	Primary B cells from peripheral blood	blood
2	chr10:22293200-22295000	Enhancers	Dnd41	blood
3	chr10:22293200-22295400	Enhancers	Primary B cells from cord blood	blood
4	chr10:22293400-22294800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr10:22293400-22294800	Enhancers	GM12878-XiMat	blood
6	chr10:22293400-22295400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:22293400-22304000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr10:22293600-22299600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr10:22294000-22295000	Enhancers	Primary T cells from cord blood	blood
10	chr10:22294000-22295000	Enhancers	Fetal Thymus	thymus
11	chr10:22294200-22294800	Bivalent Enhancer	Thymus	Thymus
12	chr10:22294200-22295000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
13	chr10:22294400-22294800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
14	chr10:22294600-22294800	Enhancers	Spleen	Spleen
15	chr10:22294600-22295000	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr10:22294600-22303600	Weak transcription	Primary hematopoietic stem cells	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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