The 2.0 version of rSNPBase

Variant report

Variant rs4336803
Chromosome Location chr1:186894402-186894403
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186854000-186897200 Weak transcription Lung lung
2 chr1:186864600-186897000 Weak transcription Esophagus oesophagus
3 chr1:186868800-186897000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:186869000-186896600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:186871400-186904000 Weak transcription Hela-S3 cervix
6 chr1:186873800-186896800 Weak transcription Small Intestine intestine
7 chr1:186878600-186895000 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:186881600-186894600 Weak transcription Stomach Smooth Muscle stomach
9 chr1:186881600-186895000 Weak transcription Primary hematopoietic stem cells blood
10 chr1:186881800-186894600 Weak transcription Colon Smooth Muscle Colon
11 chr1:186881800-186894800 Weak transcription Adipose Nuclei Adipose
12 chr1:186881800-186894800 Weak transcription Rectal Smooth Muscle rectum
13 chr1:186881800-186896800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:186884800-186894600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:186887200-186894800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:186888800-186897000 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
21 chr1:186890400-186895200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:186891600-186894600 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:186891800-186895600 Weak transcription Aorta Aorta
25 chr1:186892000-186894600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr1:186892800-186896800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:186892800-186924000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr1:186893000-186895800 Weak transcription Stomach Mucosa stomach
29 chr1:186893000-186896400 Weak transcription NHEK skin
30 chr1:186893200-186895600 Weak transcription Fetal Intestine Large intestine
31 chr1:186894200-186895000 Weak transcription Fetal Intestine Small intestine
32 chr1:186894200-186896000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:186894200-186896200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:186894400-186896200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015