The 2.0 version of rSNPBase

Variant report

Variant rs7555326
Chromosome Location chr1:186897102-186897103
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186854000-186897200 Weak transcription Lung lung
2 chr1:186871400-186904000 Weak transcription Hela-S3 cervix
3 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
7 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:186892800-186924000 Strong transcription Primary monocytes fromperipheralblood blood
9 chr1:186894600-186897400 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr1:186895000-186897600 Enhancers Placenta Amnion Placenta Amnion
11 chr1:186895400-186899600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:186895400-186904600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:186895400-186937000 Weak transcription Rectal Smooth Muscle rectum
14 chr1:186895600-186897600 Enhancers Fetal Intestine Small intestine
15 chr1:186895600-186897800 Enhancers Fetal Intestine Large intestine
16 chr1:186895600-186899400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:186895600-186903800 Weak transcription Primary hematopoietic stem cells blood
18 chr1:186895800-186899400 Weak transcription NHDF-Ad bronchial
19 chr1:186896000-186900800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:186896200-186897400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:186896200-186897600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:186896200-186902400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:186896400-186897200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:186896400-186897800 Enhancers NHEK skin
25 chr1:186896400-186908600 Weak transcription Adipose Nuclei Adipose
26 chr1:186896600-186897600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:186896800-186897200 Enhancers Rectal Mucosa Donor 31 rectum
28 chr1:186896800-186897400 Enhancers Duodenum Mucosa Duodenum
29 chr1:186896800-186897400 Enhancers Small Intestine intestine
30 chr1:186896800-186897600 Enhancers HUVEC blood vessel
31 chr1:186897000-186897400 Enhancers Esophagus oesophagus
32 chr1:186897000-186897600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:186897000-186897600 Enhancers Stomach Mucosa stomach
34 chr1:186897000-186897600 Enhancers HMEC breast
35 chr1:186897000-186898400 Strong transcription Primary neutrophils fromperipheralblood blood
36 chr1:186897000-186898400 Enhancers Colon Smooth Muscle Colon

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Last update: Aug 31, 2015