Variant report

Variant	rs4364482
Chromosome Location	chr6:55040988-55040989
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12660136	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs9296776	0.89[ASN][1000 genomes]
rs9475195	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016461	chr6:55038131-55129663	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:55040600-55041000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
2	chr6:55040600-55042800	Active TSS	Fetal Brain Female	brain
3	chr6:55040800-55041000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
4	chr6:55040800-55041000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
5	chr6:55040800-55041000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
6	chr6:55040800-55041000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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