The 2.0 version of rSNPBase

Variant report

Variant rs4375315
Chromosome Location chr1:47734461-47734462
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47705200-47766400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:47705600-47766400 Weak transcription Primary T cells from cord blood blood
3 chr1:47709800-47745000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:47712600-47735000 Weak transcription NHDF-Ad bronchial
5 chr1:47712600-47742600 Weak transcription Fetal Lung lung
6 chr1:47712800-47745600 Weak transcription Fetal Brain Female brain
7 chr1:47713000-47736400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:47713200-47745800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:47713800-47745800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:47714400-47779200 Weak transcription Small Intestine intestine
11 chr1:47714600-47745800 Weak transcription Primary B cells from cord blood blood
12 chr1:47714600-47778400 Weak transcription Fetal Heart heart
13 chr1:47714800-47741200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:47714800-47742800 Weak transcription Fetal Kidney kidney
15 chr1:47714800-47746000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:47715400-47740000 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr1:47715600-47749200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:47715800-47735400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:47716600-47739200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:47716600-47772600 Strong transcription Dnd41 blood
21 chr1:47716800-47739000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:47717000-47745800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:47718200-47746000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:47718800-47739800 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr1:47719800-47745800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:47720400-47741400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:47720400-47757000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:47720600-47766400 Weak transcription Brain Germinal Matrix brain
29 chr1:47721000-47735400 Weak transcription Fetal Muscle Leg muscle
30 chr1:47721000-47749000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:47721600-47766800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:47723400-47772400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:47724600-47739400 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr1:47726000-47745200 Weak transcription Fetal Intestine Large intestine
35 chr1:47726200-47745800 Weak transcription Primary hematopoietic stem cells blood
36 chr1:47726400-47734800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:47726600-47734800 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:47726600-47735400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:47726800-47735000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:47726800-47745200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:47727000-47745800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:47728200-47735200 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr1:47728200-47742600 Weak transcription GM12878-XiMat blood
44 chr1:47728400-47745600 Weak transcription NHLF lung
45 chr1:47728600-47755200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:47729000-47735000 Weak transcription Osteobl bone
47 chr1:47729000-47738600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:47729000-47767000 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr1:47729200-47746000 Weak transcription Placenta Placenta
50 chr1:47730000-47736600 Weak transcription NHEK skin

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Last update: Aug 31, 2015