The 2.0 version of rSNPBase

Variant report

Variant rs12117686
Chromosome Location chr1:47809681-47809682
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47800400-47834600 Weak transcription Spleen Spleen
2 chr1:47800600-47816000 Weak transcription Lung lung
3 chr1:47800600-47834400 Weak transcription Gastric stomach
4 chr1:47800600-47854600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:47800800-47814200 Weak transcription Aorta Aorta
6 chr1:47800800-47819600 Weak transcription Esophagus oesophagus
7 chr1:47801000-47813800 Weak transcription Primary T cells from cord blood blood
8 chr1:47801000-47814600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:47801000-47815800 Weak transcription Osteobl bone
10 chr1:47801000-47816000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:47801000-47816800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:47801000-47819800 Weak transcription Brain Angular Gyrus brain
13 chr1:47801000-47834000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:47801000-47834200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:47801000-47834200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:47801000-47834200 Weak transcription Thymus Thymus
17 chr1:47801000-47838200 Weak transcription NHDF-Ad bronchial
18 chr1:47801000-47850800 Weak transcription NHEK skin
19 chr1:47801200-47813000 Weak transcription Primary hematopoietic stem cells blood
20 chr1:47801200-47814800 Weak transcription HSMM muscle
21 chr1:47801200-47817200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:47801200-47821400 Weak transcription Stomach Smooth Muscle stomach
23 chr1:47801200-47823400 Weak transcription Psoas Muscle Psoas
24 chr1:47801200-47834000 Weak transcription HMEC breast
25 chr1:47801200-47834200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:47801200-47834200 Weak transcription Brain Germinal Matrix brain
27 chr1:47801200-47834200 Weak transcription Fetal Brain Female brain
28 chr1:47801200-47834400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:47801200-47834600 Weak transcription HSMMtube muscle
30 chr1:47801200-47834600 Weak transcription NHLF lung
31 chr1:47801200-47839000 Weak transcription Right Ventricle heart
32 chr1:47801400-47813200 Weak transcription Primary B cells from cord blood blood
33 chr1:47801400-47814000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:47801400-47816000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:47801400-47834200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr1:47801600-47815000 Weak transcription Fetal Muscle Trunk muscle
37 chr1:47801800-47812000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:47801800-47834200 Weak transcription Placenta Placenta
39 chr1:47802000-47814000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:47802000-47834200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:47802200-47834200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:47802400-47813400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:47802400-47813800 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:47802400-47815800 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:47802400-47816800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr1:47802400-47821800 Weak transcription Colon Smooth Muscle Colon
47 chr1:47802400-47830400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:47802400-47834200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:47802600-47812400 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:47802600-47813400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015