The 2.0 version of rSNPBase

Variant report

Variant rs12135037
Chromosome Location chr1:47815563-47815564
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47800400-47834600 Weak transcription Spleen Spleen
2 chr1:47800600-47816000 Weak transcription Lung lung
3 chr1:47800600-47834400 Weak transcription Gastric stomach
4 chr1:47800600-47854600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:47800800-47819600 Weak transcription Esophagus oesophagus
6 chr1:47801000-47815800 Weak transcription Osteobl bone
7 chr1:47801000-47816000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:47801000-47816800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:47801000-47819800 Weak transcription Brain Angular Gyrus brain
10 chr1:47801000-47834000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:47801000-47834200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:47801000-47834200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:47801000-47834200 Weak transcription Thymus Thymus
14 chr1:47801000-47838200 Weak transcription NHDF-Ad bronchial
15 chr1:47801000-47850800 Weak transcription NHEK skin
16 chr1:47801200-47817200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:47801200-47821400 Weak transcription Stomach Smooth Muscle stomach
18 chr1:47801200-47823400 Weak transcription Psoas Muscle Psoas
19 chr1:47801200-47834000 Weak transcription HMEC breast
20 chr1:47801200-47834200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:47801200-47834200 Weak transcription Brain Germinal Matrix brain
22 chr1:47801200-47834200 Weak transcription Fetal Brain Female brain
23 chr1:47801200-47834400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:47801200-47834600 Weak transcription HSMMtube muscle
25 chr1:47801200-47834600 Weak transcription NHLF lung
26 chr1:47801200-47839000 Weak transcription Right Ventricle heart
27 chr1:47801400-47816000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:47801400-47834200 Weak transcription Primary monocytes fromperipheralblood blood
29 chr1:47801800-47834200 Weak transcription Placenta Placenta
30 chr1:47802000-47834200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:47802200-47834200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:47802400-47815800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:47802400-47816800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:47802400-47821800 Weak transcription Colon Smooth Muscle Colon
35 chr1:47802400-47830400 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:47802400-47834200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:47802600-47817000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:47802600-47817200 Weak transcription Fetal Thymus thymus
39 chr1:47802600-47823800 Weak transcription Left Ventricle heart
40 chr1:47802600-47834000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:47802600-47834200 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:47802600-47834200 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:47804000-47834000 Weak transcription Dnd41 blood
44 chr1:47804200-47816800 Weak transcription A549 lung
45 chr1:47804200-47834200 Weak transcription HUVEC blood vessel
46 chr1:47804200-47834800 Weak transcription Fetal Lung lung
47 chr1:47805000-47834000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:47805000-47834200 Weak transcription Adipose Nuclei Adipose
49 chr1:47805200-47815800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:47805400-47817400 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015